Shewanella violacea: SVI_0043
Help
Entry
SVI_0043 CDS
T01206
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosidase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
svo
Shewanella violacea
Pathway
svo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVI_0043 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svo03400
]
SVI_0043 (tag)
Enzymes [BR:
svo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
SVI_0043 (tag)
DNA repair and recombination proteins [BR:
svo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVI_0043 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
BAJ00014
UniProt:
D4ZD92
LinkDB
All DBs
Position
44498..45073
Genome browser
AA seq
191 aa
AA seq
DB search
MDKKRCGWVGDDQIYLDYHDYVWGRPVYDSKELFAKLCLDGQQAGLSWITILKKQKNYEA
AFANFEPAIIAKFDAVKVEELLQDKGIVRNRLKVNSIIKNARGYMANFSDTKSEQGNDFS
EFLWSFVGGSPIVNHFNSMEEIPVKTPESEAMSKALKKMGFNFVGPTICYAFMQAVGMVN
DHATYCFCYDK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagcgctgcggctgggttggggatgatcaaatttatctggattatcatgat
tatgtttggggtcgacccgtgtacgacagtaaggagcttttcgccaagctctgcctcgat
ggccagcaagcgggactctcatggatcaccattctcaagaagcaaaaaaactatgaagcg
gcatttgctaatttcgaacccgcgataattgctaaatttgatgctgttaaggtcgaggag
ttactccaggataaaggcatcgtcagaaaccgtctaaaggttaactccatcatcaagaat
gcgcgcggttacatggccaacttttctgatactaagagcgagcagggcaatgatttctcc
gaatttctctggagcttcgttggtggcagtccgattgtgaaccacttcaactctatggaa
gagatccccgtgaagaccccagagtctgaagccatgtctaaggctttgaaaaaaatgggt
tttaacttcgtcggaccgacaatctgttatgcatttatgcaggctgtaggtatggttaac
gaccatgcaacatattgtttttgttatgataagtga
DBGET
integrated database retrieval system
