Shewanella violacea: SVI_0449
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Entry
SVI_0449 CDS
T01206
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
svo
Shewanella violacea
Pathway
svo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SVI_0449 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svo03032
]
SVI_0449 (dnaB)
Enzymes [BR:
svo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SVI_0449 (dnaB)
DNA replication proteins [BR:
svo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SVI_0449 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
GvpD_P-loop
divDNAB
CbiA
Motif
Other DBs
NCBI-ProteinID:
BAJ00420
UniProt:
D4ZFH1
LinkDB
All DBs
Position
514978..516390
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AA seq
470 aa
AA seq
DB search
MSQQGQGSFKAKQKPRDIQMDALKMPPHSLEAEQSVLGGLMLDSDAWDRVSEAVVAEDFY
SRSHKMIFNAMATLTAASHPIDLITVSEQLEIEDQLEDAGGFAYLGEIAKNTPSAGNIVS
YAGIVRERAVVRDMIKVANEIADAGFNPEGRNSSELLDLAETKVFKIAESRTNENDGPKG
IKAILEKTVDKIEELYNNPTGGVTGISSGFHDLDKMTAGFQGGDLIIVAARPSMGKTTFA
MNLCEQAALNEEKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTM
GIMLEQGKMYIDDGSGLTPTDVRSRARRIAREHGGLSMIMIDYLQLMQVPALKDNRTLEI
SEISRSLKALAKELMIPVIALSQLNRSLEQRADKRPVNSDLRESGAIEQDADLIMFIYRD
EVYNHDTEHKGVAEIIIGKQRNGPIGRVPLTFQGQFSRFDNYAGPKFDED
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaggtcaaggttcctttaaggccaagcagaagcctagagatatccagatg
gatgctcttaagatgccaccacattcgttagaggccgaacaatctgtactcggtggtcta
atgttggattccgatgcttgggatagggtgtctgaagcggttgttgcagaagatttttat
tctcgctctcataagatgattttcaatgcgatggcaaccttaactgctgccagtcatccc
atagatctgatcaccgtttctgagcaattagaaattgaagatcagttagaagatgccggc
ggttttgcctatcttggtgagattgccaagaatactcctagcgcgggtaacatagtttct
tatgcggggattgttcgtgagcgagcggttgttcgcgacatgatcaaggtcgccaatgag
atcgccgatgcaggttttaaccctgaagggcgtaattccagcgagttactggatcttgct
gagaccaaagtctttaagattgcagagtctcgaactaatgagaacgatggtccaaaaggc
atcaaggctattcttgagaagacagtcgataagattgaggaactctataataacccgaca
ggtggtgtgaccggtatttccagtggttttcacgatcttgataagatgacggctggtttc
cagggcggcgatttgattattgtggctgcgcgtccatcaatgggtaagacgacttttgcg
atgaacttgtgtgagcaggcggcgctaaatgaagaaaagcctgtactgatttttagcttg
gagatgccttctgagcagatcatgatgcgtatgttggcctcattaggccgagtcgatcaa
accaagatacgtaccggacagcttgatgatgatgattgggctcgtgtctcatcaaccatg
ggtatcatgcttgagcaaggtaagatgtatatagatgatggctcaggtctgactccaacc
gatgttcgaagcagggccagacgaatcgcccgtgaacacggaggcctgtcgatgatcatg
atcgattacctgcagttgatgcaggtgccagctctgaaagataaccgtaccttagaaatt
tctgaaatttctcgctcacttaaggcgttagctaaagagttaatgattccggttattgca
ctgtcacagctcaaccgttcattggagcaacgtgccgataaacgccctgttaactcagat
ttgcgtgaatctggtgcgattgagcaagatgccgatttaatcatgtttatctatcgtgat
gaggtgtacaaccacgatactgagcataaaggtgttgctgaaattatcataggtaagcaa
cgtaacggtcccattgggcgtgttccgttgacattccaagggcaattctctcgttttgat
aattatgccggccccaagtttgatgaagactaa
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