Shewanella violacea: SVI_1022
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Entry
SVI_1022 CDS
T01206
Symbol
hex
Name
(GenBank) beta-hexosaminidase B precursor
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
svo
Shewanella violacea
Pathway
svo00511
Other glycan degradation
svo00520
Amino sugar and nucleotide sugar metabolism
svo00600
Sphingolipid metabolism
svo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
SVI_1022 (hex)
09103 Lipid metabolism
00600 Sphingolipid metabolism
SVI_1022 (hex)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SVI_1022 (hex)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svo03110
]
SVI_1022 (hex)
Enzymes [BR:
svo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
SVI_1022 (hex)
Chaperones and folding catalysts [BR:
svo03110
]
Intramolecular chaperones
Others
SVI_1022 (hex)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
BAJ00993
UniProt:
D4ZH44
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All DBs
Position
1192619..1195273
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AA seq
884 aa
AA seq
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MITAAITLVLVTSACSDTNIATNNPESAHSSQAKANSLDQVQLNTLGDTLEIKYRVVTNY
PQGCSTSGVDGRCFTAQIDLTSAVDLDSHDWAIYFSQMRPVQSVNSKEFTITRVKGDLHK
IAPTTEFTGLKQGITKTIEFKGELWQLSETDAMPNYYLVSAELEPVLIKSTAVTLDSETG
MELRPYVVSFTDEDKQYKRSDTDKVKWATAEVLFQANQGIDFQPELVTNTIIPTPLRLEV
SSTDKPVSLKGGIKLELNDVKRQAIDAALARLSRIGVKEASSGLVVSLLPLEMKSTSGAY
LLDIAKDKITISAADDAGFSYGLSSLTSLLDSNDLVINTMRVEDSPRYDFRGMHIDVSRN
FHSKQLVLDMLDQMAAYKLNKLHLHMADDEGWRLEIDGLPELTDIGSKRCHDLSETRCLL
PQLGSGPFAAAKVNGYYSKADYIEILKYAGARQIQVIPSMDMPGHSRAAIKSMEARYRKL
AATGDIKGANEYRLVDPKDTTVYSSIQYYDDNTLNVCMESTFHFVDKVIDEIAKLHQQAG
QPLSVYHIGADETAGAWLDSPICKAFLAKNNQGVTTSDEFGAYFIERVSNTLHDKGIEPA
GWSDGMSHTRPQNMPKASQTNVWDVISHKGFRRAHQQANLGWDAVLGMPEMLYFDFPYEA
DPKEHGYYWASRNTNERKLYGFMPDNLPANAEQWTDIQGEPFEADDTEKRDEAGKLVSGP
MKQGMSFSGLQGQIWSETLRSDSVVEYMTFPRLLILAEKAWHKASWEVPYQYKGAVYNHT
SGYFTQEMRNEQASQWAVLANTLGQKELLKLDMAGIEYRVPTVGAHIHDGKLLTNLIYPG
LTVEYRLKGGEWLVYHSPVAISGQVEVRAVAADGKRKGRSLIVR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
ttgatcactgccgcaatcacgcttgtgttagtaacaagcgcttgctcagatacaaacatt
gcaacgaataaccccgagtcagctcattccagtcaagctaaggctaacagcctagatcaa
gtacaactaaacacacttggcgatacattagagattaagtatcgggtagtgactaactac
ccgcaaggatgttcgacttcaggtgtcgatggccgttgcttcacggcgcagatagatctg
acctcagctgtcgacttagacagtcacgattgggctatctatttcagtcagatgcgtcca
gtgcagtcggtgaattccaaagagtttactattactcgagtcaaaggcgatctacataag
atagcgccgactactgagtttacaggactcaagcagggcatcactaagaccatagagttt
aaaggtgagctgtggcaactatctgaaaccgatgctatgccaaactattacctggtatca
gctgagttagaaccggtacttatcaagagcacggcagtgacgctggacagtgaaactggc
atggagcttcgtccctatgtggtgtcattcaccgatgaggataaacagtataagcgcagt
gataccgataaagtgaagtgggcaacagctgaggtactatttcaggctaatcagggaata
gactttcagcccgagctggtcaccaacacgataatcccaactcctttgaggcttgaagtc
agctcaaccgataagcctgtgtcccttaaaggcggcattaagcttgagcttaatgatgtt
aaacgccaagccatagatgcagcacttgctcgcctgagccgcatcggtgtcaaagaggca
tcgtctggtctagtcgttagtctcttaccactggagatgaagtctacatctggcgcatat
ttgttagatatcgccaaggataaaatcaccatctctgcggcggatgatgcgggtttctcc
tatggcctatcttcactgaccagtcttctcgatagtaatgacttggttattaacaccatg
agagtcgaagattccccccgttatgattttcgcggcatgcacatagatgtgtcgagaaat
tttcacagtaagcagctggtgttggatatgttagatcagatggcggcctataaactgaat
aagctgcatctgcacatggccgacgatgagggttggcgtctggagatagacggcttacct
gaactcacagatatcggcagcaagcgatgtcatgacttgagtgaaacaaggtgcttgtta
cctcagcttggtagtggcccgtttgccgctgctaaggtcaatggctattactcaaaagcc
gattatatcgagatattaaaatatgctggcgccagacagattcaggtcattccctcaatg
gatatgccgggacactcaagagcggccatcaagtccatggaagcgcgttatcgcaagcta
gctgcaaccggtgacataaaaggggctaatgagtatcgtttggtcgaccctaaagacacc
actgtctattcatcgatccaatactatgacgataacacccttaacgtgtgtatggagtcg
acctttcacttcgtcgataaggtaatcgacgagattgctaaattgcatcaacaagcgggt
cagcctctatctgtctatcatattggtgccgatgaaactgccggtgcctggttagactct
ccaatttgtaaggcgtttcttgccaaaaataatcaaggcgtgaccacaagcgatgaattt
ggtgcctattttatcgagcgtgtatcgaataccttgcatgataaaggtatagagcctgcg
ggttggagtgatggtatgagccatacccgtccacagaacatgccgaaagcctcccaaacc
aatgtatgggatgttatctcacacaaggggtttcgccgcgcgcatcagcaagccaattta
ggttgggacgcagtattgggtatgcctgagatgctttattttgattttccctatgaggct
gatcctaaagagcatggatattactgggcgagtcgtaacaccaacgagcgtaagttatat
ggttttatgcctgacaacttgccggccaatgccgaacagtggaccgatattcaaggtgag
cccttcgaagccgacgacactgagaaacgagatgaagcaggtaagctagtcagtggccca
atgaagcaagggatgtctttttccgggcttcaggggcagatctggagtgaaacactcaga
agcgattccgtggttgaatatatgacttttccacgtctacttatcttggctgagaaagcc
tggcataaggcgagctgggaagtgccctatcaatataaaggggctgtttataatcacact
agcggctactttacccaagagatgcgcaatgagcaggctagccagtgggctgtattagct
aatactctggggcaaaaagagttacttaaactcgatatggctggcatcgaatatcgggta
cccactgttggtgctcatatacatgatggaaagctgctaacgaatcttatctacccgggt
ctgaccgttgaatatcgacttaaggggggtgagtggcttgtttatcattctcctgtcgct
atctctggtcaagtagaagtcagggccgtagcggccgatggtaagaggaaaggccgttcc
ttaatcgtaagataa
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