Shewanella violacea: SVI_2912
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Entry
SVI_2912 CDS
T01206
Name
(GenBank) TPR domain protein
KO
K07114
Ca-activated chloride channel homolog
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_2912
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_2912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_7
TPR_1
TPR_16
TPR_11
TPR_12
TPR_10
ANAPC3
TPR_14
TPR_6
TPR_8
TPR_19
Motif
Other DBs
NCBI-ProteinID:
BAJ02883
UniProt:
D4ZMI4
LinkDB
All DBs
Position
3297600..3299618
Genome browser
AA seq
672 aa
AA seq
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MHFLRPEWFFALLPLILLILLLWHRERKNSTWNRYIAPHLARLLVTQAKEIKPSKLWYLG
LAWLVAVFALSGPAFTKQSLPVFEAAQGRVIVMDMSQSMYATDLAPNRLAQAKFKATDLI
GELKEGETGLIAYAGDAFTISPLTRDRATLLNLLPTLSPNIMPVRGSNLVAALERGKNLL
AQGGHIRGDILLLTDGLSTRQMHGAKAVLEGTQYRLAIMAFGSKQGSPIRLPDGQLLRDH
ANQVVVAKTNYSLLNELAQAADGVLIPYRSDNQDIEQIQTWLSSTGDTKATELDGEIWQD
AGPYIALLLLLPVLLSFRHGLVAAIAVCIIYIPNPVQASSWDDLWQTQDQQGMQAYQAEN
FDQASDSFKSPQWQASALYKAGKYDEALPLFEQDGSASGLYNQGNTLMQQNKYHEAIKRY
QDALAQSPELTGTKDNLELAKKLAQQQDSQDKNKSDQDKSNKDKSDQDKSKNDESEQDKN
QSDKNQGDKEDRQQDKSDQDSDKKSDKKSDKDKQQESKQDQQSQSNESQEDSGSDKENAG
DQSQEDKPSKNNGNDSDMQADPDKKQSQANAEKDKQDSERNKPASSDDQQQEAQEQTASQ
NPQAADDNPDEDAQAKAQAAQIHEGPEALPPEMERALRALVDDPQVLLRNKMQLEYQKRA
RHNANSKDQQQW
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcttcgccctgagtggttttttgctctactccccctgatattactcattctc
ttgctatggcatcgagagcgaaaaaattcgacatggaaccgttacattgccccccatcta
gccaggctattagtcacccaggctaaggagattaaaccgagcaagttatggtatctcgga
ttggcttggctcgtggccgtatttgccttgtcgggacccgctttcactaagcagtctttg
ccggtatttgaagcggcccagggcagagttatcgtcatggatatgtctcagtctatgtac
gcgaccgatctggctcccaatcgattggcacaagccaaatttaaagccaccgatctcatc
ggtgagcttaaagagggtgaaaccggactcatagcttatgccggggatgcttttactatc
agccccttaacccgagatagagcaaccttactcaatctactgcccaccttatcaccgaac
atcatgccggttcgaggctctaacctagtagcagcattagagcgaggaaaaaacttactc
gctcagggcggacacattcgcggtgatatcttattgctcacagatggcctatctactcgg
cagatgcacggtgcaaaagcggtattagagggcacccagtatcgattagcaatcatggct
tttggtagtaagcaaggctcacccattcgcctgccggatggtcagctgctgcgagatcat
gccaaccaagttgtcgttgctaagaccaactactcgctacttaatgaactggcacaggct
gcagatggcgtattgatcccctatagaagtgataatcaagatatcgagcagatacagacc
tggctatcgtctaccggcgatactaaggcgactgaactggacggtgagatctggcaagat
gctggtccctatatcgcgctgttactcctgcttcctgtattgctcagttttaggcatggc
ctggttgctgctatcgctgtctgtatcatctatattcccaatccggttcaggcatctagc
tgggacgatctctggcaaacccaagatcaacaaggcatgcaagcctatcaagcagagaat
tttgaccaggcgtcagactcctttaaatctcctcaatggcaagccagtgccctgtataag
gctggaaaatatgatgaggctctaccattgttcgaacaggatggttcggcgagtggcttg
tacaatcaaggcaataccttgatgcagcaaaacaaataccatgaggcgataaaacgttat
caagatgctttagcacaaagccctgagttaacaggcacaaaagataatctcgagcttgcc
aaaaaattagcccagcagcaagacagccaggataaaaataaatcggatcaagacaaatca
aacaaggataagtcagaccaagataagtcgaaaaacgatgagtccgaacaagataaaaat
cagtctgataaaaaccaaggcgacaaagaagacagacagcaggacaaatcagaccaagac
tctgacaaaaaatctgacaaaaaatctgacaaagacaaacagcaagaatctaagcaagac
cagcaatcacaatccaatgagtcacaagaggacagtggatctgataaagagaatgcggga
gatcagagccaggaagataagccctcaaaaaataacggtaacgattccgacatgcaggcc
gatccggataaaaagcagtctcaagctaatgctgaaaaagataagcaagacagtgagcga
aataaacctgccagcagcgatgaccagcagcaagaagcacaagagcagacggcctctcaa
aacccacaagcagccgatgacaatccagatgaagatgcccaagccaaagcacaagcggct
caaatccatgaaggaccagaagcgctgcctcccgagatggagcgggcattaagagcgcta
gtcgacgaccctcaagttttactgagaaataagatgcaactcgaatatcaaaaacgtgca
agacacaatgccaactctaaggatcagcagcaatggtag
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