KEGG   Shewanella violacea: SVI_3855
Entry
SVI_3855          CDS       T01206                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svo03400]
    SVI_3855 (rep)
Enzymes [BR:svo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SVI_3855 (rep)
DNA repair and recombination proteins [BR:svo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SVI_3855 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PhoH ResIII
Other DBs
NCBI-ProteinID: BAJ03826
UniProt: D4ZCT1
LinkDB
Position
complement(4411262..4413274)
AA seq 670 aa
MKLNPGQDEAVHYVSGPCLVLAGAGSGKTRVIINKIAHLVQNCGYKARNIAAVTFTNKAA
REMKERVAKSMGRKEARGLWISTFHTLGLEIIKKEHKVVGLKKGFSLFDDQDSLALLKDL
TEDELDGDKDLLRSLMTTISNWKGNLVIPTQAVKIAKDEQSQLFAALYARYAQHMKAYNA
LDFDDLILIPTLILRHNADVRARWQTRIQYMLVDEYQDTNTSQYEMVKLLVGDRARFTVV
GDDDQSIYSWRGARPQNLVLLGEDFPALRLIKLEQNYRSSQRILKAANILIANNPHVYEK
TLFSELPYGEPLRVLIAANEEQEAERVIAEMIRHKFMGKTQFGDYAILYRGNHQSRLLER
SLMTNRIPYKLSGGTSFFGRAEIKDIMAYLRLVVNPDDDNAFLRVVNLPKRGIGPSTLER
LGTFANERQISMFEASFDPELNHHLPPAAMASIYKFGKFIVDTGETVTRGEPIEAIKHLI
RNINYEDYLYETSTSAKAAEMRMKNISELYRWVTEMLEGDDLDEGMTLPEVVTRLTLRDM
MERNSEDEGGDQVQLMTLHASKGLEFPYVFMVGTEERILPHQSSIDEDNVDEERRLAYVG
ITRAQQQLWFVLCRERRQFGETMRCEPSRFLLELPQDDLIWENRKQVQSENQRKETSKSN
IANLRDMFKK
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgaagttaaaccccggacaagatgaagccgtacactatgtatccggcccctgcctagta
cttgcgggggcaggtagtggtaagactcgagtaattatcaacaagattgctcatctagtg
cagaactgtggctataaggctagaaatatcgcggcggtgacatttaccaataaggctgca
cgtgagatgaaggagcgtgtcgctaaatctatggggcgtaaagaggctcgcggtttatgg
atctcgacatttcatactctgggtttagagattataaagaaggaacataaggttgttggg
ctcaaaaagggtttttccttgttcgatgatcaagattccttggccttgcttaaagatctc
accgaagatgagctagatggagacaaggatctactcaggtccttgatgacgactatttcc
aattggaaaggtaatctggtgatcccaactcaggcagtgaaaatagctaaagatgagcaa
tcacagctgtttgccgctctctacgcaagatatgcccagcatatgaaggcttacaatgcc
ctggatttcgatgatctgattctaattcctacactcatactcaggcacaatgccgacgtg
agagcgcgctggcagacacgtattcaatatatgctggtggatgagtatcaagataccaac
actagtcaatatgagatggtaaagcttctggtgggagatagagcacgtttcactgtggtg
ggcgacgacgatcaatcaatctattcatggcgtggagctaggccacaaaatttggtgtta
ttgggtgaagatttccctgcattgcgtttgattaagctagagcaaaactatcgttctagc
caaaggatcttaaaagcggccaatatactcatcgctaacaacccacatgtatacgagaag
acactgttcagtgaattgccctatggtgagccgctgcgggtactgatagccgccaacgag
gaacaggaggcggagcgagtgattgccgagatgatacgccataagtttatggggaaaacc
caattcggtgattatgccatcttgtatcgaggtaaccatcagtctcgcttgttggagcga
tcactgatgacgaaccgcattccttataagctcagtggtggtacttcattcttcggcagg
gccgaaatcaaagatatcatggcctatctcagattagtggtgaacccggatgatgataat
gccttcctgcgcgtggtgaatttgcctaaacgtgggattggcccatctactctggaacgt
ttaggcacatttgccaatgaacggcagatctctatgtttgaagccagtttcgatccagag
ttgaatcatcatctgccgccggcggccatggcgtctatctataagttcggtaagttcatt
gttgataccggtgagacagtgactcgaggggagcccattgaggccattaagcaccttatc
cgtaatattaactatgaggattatctctacgagaccagtaccagtgccaaggcggctgag
atgagaatgaaaaatatctcagagctgtatcgttgggtcactgagatgcttgagggagac
gatctcgacgaaggcatgaccttacctgaggtggttacccgcttaaccctgcgtgacatg
atggagcgtaacagtgaggacgaaggtggcgatcaggttcagttgatgacgctacacgca
tctaaaggcctggaattcccctacgtgtttatggtgggtactgaagagagaatattaccc
catcaaagtagcatagatgaggataacgtcgatgaggagcgccggctggcctatgttggc
atcacccgagcgcagcaacagctctggtttgtactgtgtcgtgaacgtcgccagttcggt
gaaacaatgcgctgtgaaccaagccgttttctattggagctgccccaggatgatctaatc
tgggaaaatcgtaaacaagtgcagagtgagaaccagagaaaggaaaccagtaagtctaat
atcgccaacttgagagatatgtttaaaaagtag

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