Shewanella violacea: SVI_3987
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Entry
SVI_3987 CDS
T01206
Name
(GenBank) membrane protein, putative
KO
K07003
uncharacterized protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
SVI_3987
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMPL
Patched
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
BAJ03958
UniProt:
D4ZDP7
LinkDB
All DBs
Position
complement(4561561..4563912)
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AA seq
783 aa
AA seq
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MNNFINAWAKFVINQRLMVIIISIFLLAVGGYFAGSIAFDQTIERNFEKGDPKLAEFNQL
LDLFGDNEYLLLGISAKKSDRDILTQETLAVVDSLTKFLETQPAVTQVRSISKYQFIKGE
GDSLLVVDLFRHQSAAHVSDGEISRARDILATEKLVQGVLVSKDLTETRIAARIEYQRQS
PAHKVALVKSLYKFVEEQGFSEQGYRIRYGGQPVFDEQFETLNKSDGDLLYPVMVLIMML
VLFICFRSVLATFVPWLVIIFTIVMLSGLQGGLGFPQSAVSQALMPTIIIVGIGVTMHLL
LEFFRLQQTHSSKDAIEQAMTQLWIPSFYTAITTALGFITLSVTKIVPVKEMAYLGAAGV
MMLFILSFTLLPAVLSYAKNISVKTQAVMTTGWVTRFTQQLPEFVYRYRLGIMLIALSLA
IFSVFTLPKIKVDTNFVEYFKSSNTARQDMQYFDETFNGALTLELIIDSGKIDGAKSPSF
LTRVDALQQYLESRVSTGEIVSQIDYLKEVYQSLNEEQSEFYTLPGSSDQVAQSLFLYEN
AGPEEDLSDLRDFDNRYLRLTVPMINMAASEVQVELEQIKQDLANNYSDLNITLTGLKIL
FQAQDIYTNHGMFYSFTLTLCFISLFFILLFRSFKYGLLCIIPSVLPIMITGGGIALLGL
KLDLGTMIVGAMTMGIAVDDSIHVMSRYLTAKKSGHSTHKAISLAMAHAGRAVILSSVVL
VLGFSVLMLASFVPIIYVGVFSACIMFLALLGDLFILPATLYLLDGDKVNIEDAVVIDKG
DTA
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttattaatgcttgggctaagtttgtcattaaccaaaggttaatggtcatc
attataagtatatttcttcttgctgtagggggatactttgcaggtagcattgcattcgat
caaaccatcgagcgtaacttcgagaagggcgatcctaagctagctgagtttaatcaatta
ctcgacttatttggtgataacgaatatttattactgggtattagcgccaaaaaatcagat
cgggatatcttaacccaagaaacactcgccgttgttgattcactgactaaatttcttgaa
acgcagcctgcggttacccaagtgcgctctataagtaaataccaatttatcaaaggcgag
ggtgactctttgctggtggttgatttatttaggcatcaaagtgcagctcatgtcagtgat
ggcgagatcagtagagcgagagatattttagccacagagaaactggtgcagggtgtttta
gtatccaaagacttaacagagacccgtatcgccgcacgtattgaatatcaaagacaatcg
ccagctcacaaggtcgcgttagtgaagtctctgtataaatttgtcgaggagcaaggtttc
tccgagcaaggctatcgtattcgttatggcggccagccagtgtttgatgagcagtttgag
accctaaataagagtgatggtgatctactctaccctgtgatggtgctgatcatgatgttg
gtgctatttatttgttttcgttctgtgcttgccaccttcgtaccttggttagtgattata
ttcacaatagtcatgctgagtggcttacaaggagggttaggttttccacaatctgcggta
tcacaagccttaatgccaaccatcataattgtcggtattggggttaccatgcacctgctg
ttggagtttttccggctgcaacagacccacagcagtaaagatgcgattgagcaagctatg
actcagttatggatcccttcattttatactgccatcacaacagcattgggctttatcacc
ttatcagtgaccaaaatagtgccagtgaaagaaatggcctacctgggcgccgcaggggtg
atgatgttatttatcctgtcttttactttattaccagcagtcttgagttacgccaaaaac
atatcggtaaaaacccaggctgtgatgaccacaggttgggtgacgcgcttcacccagcaa
ctacctgagtttgtttatcgctatcgactcggcatcatgctaattgccctgtcgctggct
atattttcggtatttaccttaccgaaaataaaagtggatactaattttgtcgagtatttc
aagagcagtaataccgccagacaagatatgcagtattttgatgaaacctttaatggtgcg
ctgacgttagagctgatcatagactcaggtaaaattgatggtgctaagtcgccaagtttt
ttgacccgcgtcgatgccctgcagcagtatcttgagtcaagggtgagcaccggagaaatt
gtctcacagattgattatctcaaagaggtgtatcaatcactcaatgaagagcagagtgag
ttttataccttgcccggcagcagtgatcaggtggcacaatccttattcctgtatgaaaat
gccggccccgaagaagacctatccgatctgcgtgacttcgataaccgctacctgcgcctc
actgtgcctatgattaatatggccgcatccgaggtgcaagttgaactggaacaaatcaaa
caagacttagctaataattacagtgatttaaatattactttgactgggctgaaaatcctg
tttcaagcacaagatatttataccaatcacggtatgttctattcatttacgctgacatta
tgctttataagcctgttttttatcctgctatttagatcattcaaatacggattgttatgc
attattcccagtgtgctaccgataatgatcaccgggggagggattgccttgttaggctta
aaactcgacctaggtaccatgattgtgggggcgatgacgatgggcatcgccgtcgacgat
agtattcatgtgatgagccgctatttaaccgccaaaaaatcgggtcactctacgcataag
gccataagtctagccatggctcatgcggggcgtgcggtcattcttagctcagtggtgcta
gtgctaggtttttcagtactcatgctcgcttcttttgtaccgattatttatgtgggcgtc
tttagtgcttgcatcatgttcctagccttactcggcgatctatttattcttcctgccacc
ttgtatctcctcgacggtgacaaggtcaatatcgaagatgccgtggttatcgacaaagga
gatacagcttaa
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