Streptomyces viridifaciens: CP971_15000
Help
Entry
CP971_15000 CDS
T06960
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
svr
Streptomyces viridifaciens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
Sigma70_r4_2
zf-HC2
Motif
Other DBs
NCBI-ProteinID:
QEV00408
LinkDB
All DBs
Position
3455479..3457944
Genome browser
AA seq
821 aa
AA seq
DB search
MPSFARGWSQCPDARPSRAVGAAPRGTVRLRTPARPATLRGLSWNLGSVVSAEEQNDYGY
GLDFGGFSGSTAGGSAAGPGGTGASQVPGSPGSSGAAAGSGAGHVPDQGGWPGRESLSAA
RPPGRVPGQAPAGQGGVAPEAFVGDGLPARRPARPTVPAPADPVDGERPPSDAELTARVR
AGDDTAYEEIYLRHADSVRRYARTCCRDSFTAEDLAGEVFARTLQALKAGKGPEFAVRAY
LLTAVRNVAAAWTRSERREQLVDDFGLFAQSSAAVAGFDLADPGADAWAMAMADRRMVMQ
AYAELPEDDRVVLWHTEVERESPKTVAVMLGKTANATAVQAHRARDRLAAAFLQAHISGS
QESTCEAYANRLGAYARGSLRKRASAEVGRHLKECDRCTAACLELTEINTGLRALLPGGV
LVWVGVGGFSAAAAAVGGAAAVGGAAAVGTAAASAGSSGTAAGASGASGAAGAGGAAGTA
GASGASGASGGSAVGAAAGEGLGTAAKAGIAAAVAVAAAAAVAAYALTGSPDPTPPVAAP
QAAFSAPAFPAPVVPAPAPPTPAPTSAAPAPVPVPAAPERPAPSPSASPSPKPTPKQIAP
PVATRAPRHEPAPEPTTEAPVVPIPAPALPALPALPTLPPLPPLPTPEVPVVPTPTVPPV
PEPTVTPPGPPAPTDFWGDSLPVWKPGNHRVPPEGPSIRRKGSDRFWQRDGGWIGGDYHP
HAITVHAPATTLVDLNRSCTSFDAVAGVDDATLSPGGVVFTVQSGDGSTLWRSRPIGAGD
DAVPVHVPLAGQKSIRLVVTPVHGIWSALNVADWAQARFRC
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccatcctttgcccgtggttggagccaatgtcccgatgcgcgcccttcgcgcgccgtc
ggcgccgcaccccggggaaccgtgcgcctacgcacacccgcgcgccctgccacactacgg
gggctgtcgtggaatctggggtccgttgtgagcgccgaggaacagaacgactacgggtac
ggcctcgacttcgggggcttctccggtagtacggccggagggtccgccgcgggccccggc
ggcaccggcgcgtcccaagtcccgggatccccaggcagttcgggcgctgcggccggttcc
ggcgcagggcacgtcccggaccagggcggatggcccggccgcgagtcgctgtccgctgcc
cggccgcccggccgggtgcccggccaggccccggcggggcagggcggtgtcgcccccgag
gcgttcgtcggtgacggtcttccggcccgtcgtcccgcccgcccgaccgtgcccgccccc
gccgacccggtggacggcgagcgcccgccctccgacgccgagttgaccgcccgggtccgg
gccggggacgacaccgcgtacgaggagatctacctccggcacgccgactcggtgcgccgc
tacgcccgcacctgctgccgggacagcttcaccgccgaggacctcgcgggcgaggtcttc
gcccgcaccctccaggcgctcaaggcgggcaagggcccggagttcgccgtccgcgcctac
ctgctgacggccgtgcgcaacgtcgccgccgcctggacccggagcgagcggcgcgaacaa
ctcgtcgacgacttcggcctgttcgcccagagctcggccgccgtcgccggcttcgacctg
gccgaccccggcgccgacgcctgggccatggccatggccgaccggcggatggtcatgcag
gcctacgcagaactccccgaggacgaccgggtggtgctctggcacaccgaggtcgaacgg
gagtccccgaagaccgtcgccgtgatgctcggcaagaccgccaacgccaccgccgtccag
gcccaccgggcccgcgaccggctggccgccgccttcctccaggcccacatctccggcagc
caggagagcacctgcgaggcgtacgccaaccggctcggggcgtacgcgcggggctcgctg
cgcaagcgggcctcggcggaggtcggccggcacctcaaggagtgcgaccgctgcacggcg
gcctgcctggaactcaccgagatcaacaccggtctgcgcgcgctgctgcccggcggtgtg
ctggtctgggtcggggtcggcgggttcagcgccgccgcggccgccgtgggcggtgccgcc
gcggtcggcggtgcggccgcggtgggaacggcggcggcctcggccgggtcctcgggcact
gctgcgggggcctccggtgcttccggcgcagcgggtgccgggggcgcagcaggtactgcg
ggtgcctccggtgcttctggcgcttccggcgggagcgctgtcggtgccgcggccggcgag
ggcctgggcaccgcggccaaggccgggatcgccgccgccgtcgcggtggcggccgccgcc
gcggtggccgcctacgcgctgaccggctcgcccgacccgacgccccccgtggccgctccc
caggccgccttctccgcccctgccttccccgccccggtggtgcccgcgcccgcgccgccc
accccggcgcccaccagcgccgcaccggctccggtcccggtcccggcggccccggaacgg
cccgcgcccagcccgagtgcgagccccagtccgaagccgaccccgaagcagattgcgccc
ccggtcgccacccgggccccccggcacgaaccggccccggaaccgaccaccgaggcgccg
gtcgtcccgatcccggccccggcccttccggcccttccggcccttccgaccctcccgcca
ctgccgccactgccgacgccggaggtgccggtcgtcccgacgcccaccgtgccgccggtg
ccggaaccgaccgtcaccccgcccgggccgcccgcccccaccgacttctggggcgactcc
ctgcccgtgtggaagcccggcaaccaccgggtgccgccggaggggccgagcatccggcgg
aagggcagcgacaggttctggcagcgcgacggcggctggatcggcggcgactaccacccg
cacgccatcaccgtgcacgcgccggccaccacgctggtcgacctcaaccgcagctgcacg
tccttcgacgcggtcgccggggtcgacgacgccacgctcagccccggcggcgtcgtcttc
accgtccagagcggcgacggcagcaccctttggcgctcccggcccatcggcgccggggac
gacgcggtgccggtgcacgtgccgctggccgggcagaagtcgatccggctggtggtcacg
ccggtgcacggaatctggtccgcgctgaacgtcgcggactgggcgcaggcccggttcagg
tgctag
DBGET
integrated database retrieval system
