Setaria viridis (green foxtail): 117842021
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Entry
117842021 CDS
T07951
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 10b-like
KO
K15151
mediator of RNA polymerase II transcription subunit 10
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117842021
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
117842021
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med10
DUF6240
V-SNARE
DHC_N1
Stealth_CR3
Motif
Other DBs
NCBI-GeneID:
117842021
NCBI-ProteinID:
XP_034578244
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Position
2:36873011..36875946
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AA seq
188 aa
AA seq
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MDNAAPNPSAAAAAAGNGVQASGTAGGERPEDASKQNLAQVTSSIQKTLGLLHQLNLTVS
SFNSASQLPLLQRLNALVAELDTMQKLAEGCNIQVPMEVVNLIDDGKNPDEFTRDVLNSC
IAKNQITKGKTDAFKSLRKHLLEELEQAFPEDVEQYREIRATSAAEAKRLAQSQSSLPNG
DVKVKAEH
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgccgccccgaacccttccgcggctgccgcggcggcagggaacggcgtccaa
gcgtcggggaccgccggcggggagcggcccgaggacgcgtcgaagcagaacctggcgcag
gtgacgagctcgatccagaagacgctgggcctgctccaccagctcaacctcaccgtctcc
tccttcaactccgcctcccagctcccccttctccagcgcctgaacgcgctcgtggcggag
cttgacacgatgcagaagctcgcggaggggtgcaacatccaggtgcccatggaggtcgtc
aatttgattgacgacgggaagaatcctgacgagtttacaagggacgtgctcaatagctgc
atcgccaagaaccagatcaccaagggcaagactgacgctttcaagagcctacggaagcat
ctccttgaagagcttgaacaagctttccccgaggatgtagaacaatacagggagatacgt
gctacttctgctgctgaggcaaagcggttggctcagtcccagagcagtttgcctaatgga
gatgtcaaagtgaaagctgagcactga
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