Setaria viridis (green foxtail): 117843811
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Entry
117843811 CDS
T07951
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117843811
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117843811
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117843811
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117843811
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117843811
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117843811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
117843811
NCBI-ProteinID:
XP_034580417
LinkDB
All DBs
Position
2:complement(35416612..35422307)
Genome browser
AA seq
1061 aa
AA seq
DB search
MGKKVKAKPKNLRKAQERGPSASSSDVGPSDAASQDTSHAAEEATASASGREHCGHYSRD
TAHLDRVLLEILSSKHAASCEHCREDAPRKKGGAGNKEKGGKKKKGGASKGAAAKAQAKA
EKSDMWVCLDCGRHFCGGAVEDTKPYGHARRHAKQDRHWWAARYDDPTVAYCLSCEKELP
IEMPKLETVVAAAVDEKVVSVEDTDALYSVNPHVNVIKGLPNLGNTCFFNAVLQNLLALD
SLRRKMLGPDVPTGALAMSLKKLFAETSASNHAGGALSPKNLFSSICSKYPQFRGYQMQD
SHELLRCFLDGLRTEETEARKLAEEASDAGVPTIVDSIFGGLLSSTVSSTECSHSSVKHD
QFLDLSLPVPSRRPPTKSVSSPPAKRTKQSIRDRNKSRRYGKIPARASPSVESNKEKIQT
IAERNNSQIPGSELEQVVSEKELVPSVCSESCASVSNQEPKVTSNVEDSVCWLDYLDNAD
ETKSEVLDSADSTEVGQIWESQDVAQGPLHPQDDALPKEQILGSEHSGENTVDDTASLQP
VILLPYKGFSTSAKEMNETIENSQNSECAIPPPVVSLVTENNAQPAFGGDVEQDDYVGFG
DMFNEPEVTSEVKKETSKAEDIDVMAWSSNSADDEVDDSNAPVSVEGCLALYTEPELLSE
PWLCEHCTNAARLKADKAKNDMEMGDGANEIKDGEETMEGGDGRQDGEKLIMSCNKEDID
QIMTTGGCKKDIDQIMASDDCSDNVHSDVNCKEGGCANPSLADPEQNCNGNFRDSENTTM
QRTGAVFTTDNTEPSNSQTDHKEQCVDLKRLELESSSLNKQQHVSDIQYNDGHNVDITAE
ATGAPVSCDSDSVSCNATNNVEAERVGGAEEVVSSSLPSDAQKTLQSAKDNEEVNTRNQG
RRKRMKMVGKAQQVQDNQNKKKEDATKVFRAAMRRILISKAPPVLTINLNRFSQDSHGRY
KKLKGHVRFKEMLDIQPFMDPRCKETNNTIYHLVGVVEHLGTMTGGHYIAYVRAAKIGGR
QQQSSGLKSWFYASDGQVREASLEEVLNCEAYILFYERVGD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaggtgaaggctaagcccaagaacctgcggaaagcgcaggaacggggtcct
tcagcctcatcctcagatgttggacccagcgatgcagcatcgcaggacacaagccacgca
gcagaagaagcaactgcgtcagccagtggcagggagcattgcggccactacagccgtgac
actgcccacttggacagggtcctcctggagatcttgtcttccaagcatgctgcatcgtgt
gagcattgccgggaggatgcccccagaaagaaaggcggggctggaaacaaggagaaaggt
gggaagaagaagaaaggaggcgcctccaaaggtgctgctgccaaggcgcaggcaaaggct
gagaaaagtgatatgtgggtttgcttggactgtggtcggcatttctgtggtggtgcagta
gaggatacaaagccctatggccatgccaggcggcatgctaagcaggatcggcattggtgg
gctgcaaggtatgatgacccaacagttgcttattgtttgtcatgtgaaaaggagttgcca
attgagatgcccaaattagagacagttgtggcagcagcagtggatgaaaaggtggttagt
gttgaggatactgatgcattgtattcggttaacccccatgttaatgtgatcaaagggctg
ccgaatcttggaaacacatgcttcttcaatgcagtgctgcagaacctccttgcgcttgat
agcttgcgcaggaagatgttaggaccagatgttcctacaggggcccttgctatgtcattg
aagaagctctttgcagagacaagtgcttcaaatcatgcaggaggcgcgcttagccctaag
aacctcttctcaagcatttgctcaaaatatccgcagtttagaggctaccagatgcaggat
agccatgaattactccgctgttttcttgatggtttacgtacagaggaaactgaagcacgg
aagctagcagaagaagcttcagatgcaggggttcccacaattgtcgactccatctttggg
ggtctgctgtctagtactgtgtccagcacagaatgctcacacagttctgttaaacatgat
caattccttgatctctcactcccagttccatcaaggaggcctcctaccaagagtgtttca
tccccacccgcaaagaggaccaaacagtccatacgagataggaacaaaagtcgcagatat
gggaagattcctgctcgagcatctccatcagtggagagtaacaaagaaaagattcaaaca
attgctgagcgcaacaattcccaaattcctggttcagaactcgaacaggtagtcagcgag
aaagaacttgtgccctctgtctgcagtgagtcatgtgcttctgtgtctaatcaagaacca
aaggtcacttcgaatgtggaggatagtgtatgctggttggattaccttgacaatgcggat
gaaacaaaatctgaggttcttgattctgcagattctactgaagtgggacagatttgggaa
agtcaggatgttgcacagggtcctttacaccctcaggatgatgccctacctaaagagcaa
attttgggttctgagcactcaggtgagaacactgttgatgatactgcctctttgcagcct
gttatcttacttccttacaaaggattcagtacttctgccaaggaaatgaatgaaaccata
gaaaattcacagaattcagaatgtgcaattcctcctccagttgtttctctggtaacggaa
aataatgcacaacctgcatttggtggagacgtagaacaagatgactatgttggttttggt
gatatgttcaatgaaccagaagttacttctgaagtcaagaaagaaactagtaaagctgaa
gatattgatgtgatggcttggagtagtaatagtgctgatgatgaagtagatgatagtaat
gctcctgtatcagttgagggctgcttggctttatatactgaaccagagctgctatctgaa
ccatggttgtgtgagcactgtactaatgctgcacgtctaaaggctgataaagcaaagaat
gacatggagatgggggatggtgctaatgaaataaaggatggtgaggagacgatggaaggt
ggtgatggaagacaagatggtgagaagttgatcatgagctgcaacaaggaggacattgat
cagattatgacaactggtggttgcaaaaaggacattgatcagattatggcaagtgatgat
tgctcggacaatgtacattctgatgtaaactgcaaggaaggtggatgtgcaaatccttct
ttggctgaccctgaacaaaactgcaatggtaattttcgagactcagaaaatactactatg
cagagaactggtgctgtgttcactactgacaacactgaaccgtcaaacagtcagactgac
cataaggaacagtgtgtggatttgaaaagattagaactggagtcctcatctttgaataag
caacaacatgtttcagatatccagtacaatgatggacataatgtggatataactgctgaa
gcaacaggtgcgccagtgagttgtgatagtgattctgtctcttgcaatgcaaccaacaac
gtagaagctgaacgtgttggtggtgctgaagaagttgtgtctagtagccttccatccgat
gcacaaaaaaccttgcagagtgccaaagataatgaagaagtcaacacaaggaaccagggc
aggaggaagcgaatgaagatggttggtaaggcacagcaagtgcaagataaccaaaataaa
aagaaagaggatgcgacaaaggttttcagagctgcaatgagaagaattcttataagcaag
gctccacctgtattgacgattaacttgaacagattcagccaggattcacatggtcgatat
aagaaattgaaagggcacgtgcgctttaaggagatgcttgacatacaaccattcatggac
ccaagatgtaaggagaccaacaataccatttaccatctagttggcgttgttgagcacttg
ggaaccatgacaggaggtcattatattgcgtacgtgagagctgccaagattggaggccgg
cagcagcagagcagtggcttgaagtcttggttttatgcaagcgatggacaagtcagagaa
gcctctctggaggaagttctgaactgcgaggcttacattctcttttatgagagggtgggc
gactaa
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integrated database retrieval system
