Setaria viridis (green foxtail): 117843936
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Entry
117843936 CDS
T07951
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial-like
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00020
Citrate cycle (TCA cycle)
svs00785
Lipoic acid metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
svs01210
2-Oxocarboxylic acid metabolism
Module
svs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
svs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
117843936
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
117843936
Enzymes [BR:
svs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
117843936
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Mrx7
baeRF_family12
DUF4883
Motif
Other DBs
NCBI-GeneID:
117843936
NCBI-ProteinID:
XP_034580610
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All DBs
Position
2:complement(47800772..47805660)
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AA seq
1017 aa
AA seq
DB search
MTWFRAASGAARLALRRSLATRAPTAAAATRCARGFHSTALRPRSAAPAPRAVPLSRLSD
SFLDGTSSVYLEELQRAWEVDPSSVDESWDNFFRNFVAQASPSAGVSGQTIQESMQLLLL
VRAYQVNGHMMAKLDPLGLDDRAVPEDLHLGLYGFTDADLDREFFLGVWRMSGFLSENRP
VLTLREILSKLQQAYCGPIGYEYMHIPDRDKCNWLREKIETAKPRDYDKERRLVMLDRLI
WSTQFENFLATKWATAKRFGLEGGETLIPGMKEMFDRAADLGVENIVIGMPHRGRLNVLG
NVVRKPLSQIFSEFTGGTRPVEGEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANP
SHLEAVDPVVIGKTRAKQFYSNDADRTKNMGILIHGDGSFAGQGVVYETLHLSALPNYTT
GGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDLEAVVRVCELAAEWR
QTFHSDVVVDLICYRRFGHNEIDEPSFTQPKMYQVIKNHPSSLKLYEQKLLGTGEVSKED
VQRIHDKVNRILNEEFTKSKDYVPNKRDWLSAYWTGFKSPEQISRVRNTGVKPEILKRVG
QAITTLPENFRPHRAVKKIFELRAAMIESGEGIDWAVAEALAFATLIVEGNHVRLSGQDV
ERGTFSHRHAVLHDQDTGAKYCPLDHVAMNQSEELFTVSNSSLSEFAVLGFELGYSMENP
NSLVLWEAQFGDFANGAQVMFDQFLSSGEAKWLRQTGLVVLLPHGYDGQGPEHSSSRLER
FLQMSDDNPFVIPEMEPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHREFRKPLIVTAP
KNLLRHKDCKSNLSEFDDVEGHLGFDKQGTRFKRLIKDRNDHKQVEEGINRLILCSGKVY
YELDEERKKSERSDIAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYSYIS
PRLYTAMKALGRGSFEDIKYVGRAPSAATATGFLSVHVQEQSELVKKALQPEPIKFP
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggttccgcgccgcctcgggcgctgcccgcctcgccctccgccgcagcctcgcc
acccgcgcgccgacagccgccgccgccacccgatgcgcccgcggcttccactccaccgcc
ctgcggcctcgctccgccgcccccgcgccccgggccgtcccgctctcccgcctctccgat
agcttcctcgacggcaccagcagcgtctacctcgaggagctccagcgcgcctgggaggtc
gacccctcctccgtcgacgagtcctgggacaacttcttccgcaacttcgtcgcccaggcc
tccccctccgccggcgtctccggccagaccatccaggagagcatgcagctcctcctcctc
gtcagggcctaccaggtcaacggccacatgatggccaagctcgaccccctcggcctcgac
gaccgtgccgtccccgaggacctccacctcggcctctacggcttcaccgacgccgacctc
gacagggagttcttcctcggcgtctggaggatgtccggcttcctctccgagaaccgccct
gtcctcaccctccgcgagatcctcagcaagctccagcaggcctactgcggccccatcggc
tacgagtacatgcacatccccgacagggacaagtgcaactggctcagggaaaaaatcgag
accgccaagcccagggactatgacaaggaacgtcgcctcgtcatgctcgacaggctcatc
tggagcacgcagttcgagaacttcctcgccaccaagtgggccaccgccaagaggtttggc
cttgagggtggtgagacactcatccctggcatgaaggagatgttcgatagggctgctgac
ctcggcgtcgagaacatcgtcattgggatgccgcacagggggaggctcaatgtccttggt
aacgtcgtccgcaagccattgtctcagatattcagcgagttcactggcggcacaaggcct
gttgaaggtgaggatgggctctacactggaactggtgatgtcaagtaccacctgggtacc
tcttatgaccgcccaactcgtggtggcaagaggattcacttgtctttggtcgccaatccc
agtcatctggaagctgttgatcctgttgtcattggcaagacgcgtgccaagcaattctac
tccaatgatgccgacaggacaaagaacatgggtattctgatacacggagatggtagcttt
gctggccagggtgtggtctatgagacgctccatctaagtgctctcccaaactacactact
ggtggaaccatacatattgttgttaacaaccaagtcgcctttacgactgatccaagagct
ggcaggtcctcccagtactgcacagatgttgccaaagccctgaatgctcctatattccat
gtaaatggtgatgatttagaggctgttgtccgtgtatgtgagcttgcagctgagtggcgc
cagacttttcactcagatgtcgtcgtcgatctaatctgctaccgccgttttgggcataac
gaaatcgatgaaccctccttcacacagccaaagatgtatcaggtcattaagaaccatccc
agttcattgaagctttatgagcagaaactgctaggaacaggtgaagtctcgaaagaagat
gtccagaggatccatgacaaggtgaaccgaatcttgaatgaagagtttacaaagagcaaa
gactatgttcccaacaagagggattggctctctgcttattggactggctttaagtcgcca
gagcaaatatcgcgtgttcggaacactggggtcaagccggagatactgaaacgtgtagga
caagcaattactacactgcctgaaaacttcaggccacacagagcagtgaagaagattttt
gagctgcgtgcagctatgattgagagtggtgaaggaattgattgggctgttgcagaagcc
ctagcctttgcaacacttatagtggaaggcaatcatgttaggctaagtggacaggatgtg
gaaagaggaactttcagccaccggcatgcagttctgcatgaccaggatactggagcgaag
tactgcccacttgaccatgttgcaatgaatcaaagtgaggagctgtttactgtaagtaac
agttcgctttcagaatttgctgtccttgggtttgaattgggttactccatggagaaccct
aattcattggttctttgggaagcacaatttggtgactttgccaatggcgcgcaagtgatg
tttgaccagtttctgagcagtggagaggcaaaatggttgcgccaaactggccttgttgtt
ctgcttcctcatggttatgatggccaaggccctgaacattccagttctcgtttggagcgc
ttccttcagatgagtgatgataatccttttgtcatacctgagatggaaccgacacttcgc
aagcagatccaagagtgtaactggcaagttgtgaatgtgacaactcctgcaaattatttc
cacgtgttgcgtcgtcagatacatagggagttccggaagccactgattgtaacagctccc
aagaacctgcttcggcacaaggattgcaagtccaatctttctgagtttgatgatgttgaa
ggccatctaggatttgataagcagggaacacgtttcaagcggctgataaaggaccgcaac
gatcacaagcaagtcgaggagggtatcaaccgtcttatattatgttctgggaaagtttac
tatgaacttgacgaagagcgtaaaaagtcagagcgcagtgacattgcaatttgcagggtt
gagcaactttgcccattcccgtacgaccttatccaaagagagctcaagagatatccaaat
gcggagattgtgtggtgccaggaggagcccatgaacatgggtgcatacagctacatctct
cctcggctgtatactgccatgaaggctctcgggcggggttcatttgaagatatcaagtac
gtcggcagagcaccttcagctgctacagccactggcttcctgtcggttcatgtgcaggag
caatcagagctagtaaagaaggcacttcagccggagccgatcaaattcccctga
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