Setaria viridis (green foxtail): 117844803
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Entry
117844803 CDS
T07951
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A-like
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117844803
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
117844803
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GFIT
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NCBI-GeneID:
117844803
NCBI-ProteinID:
XP_034581482
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Position
2:47183841..47192245
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AA seq
1307 aa
AA seq
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MAAVKASEARGDPPLLRAVELARVVAGEGAGIPSADLAGILVSNLCFAHNSPSLWKLVGQ
AMASRLLCPLHVLALLTPRVLPQRRAQPEAYRLYLELVKCNITSSSLSMEAGPNRDKITK
SISDALQLSKIYGFSGTEFGHVVIMFVLAVTTKLIDSILEDCGFPSGMEEGQESVYAIEG
PQPMDLDVKRVSTENQNEHREQLRRKNTAMALDVLHMMVADRKIQSFLRLIFLNMPEKFS
SLSQRLSSIEAHKVALERLLPSGHKINDLLIDIRRVCNANYQPNNKRIVDVLGNMRSGGS
LLGQLTGAGRAACWIIFDIYVENAIDGKHLSGISAIEVLKEMTKTLQVLNEASWQETFKA
LWISALRLVQRAREPLEGPIPHLDARLCMLLALIPLSVDAILKEESDIFGAEGSKILPRR
QGLISSLQDLIQYSGLLVPPSSVVNAANAAASKAAIFKANYTAGVVNSSMVAQTDSSTKV
SMKAVGNMLHLIIEACISRKLMDTSAYLWPGYVVSSGPLKDTTLPQESPWLNFIKGAPLS
DPLIDALVATPASSVGELEKLYNIAANGSEEEKTAAAKILCGASLVRGWNIQEHVVGMVV
KLLSASLPSDSSISTTGSMNHYLAQMSTLNEILLGVSYGDAIHILSLYGMVPDVAAALMP
LCEAFGSIAPPPNHKSTILGETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLE
LTLDYLLLMRNNRIDLSNSSAPSRDSYNNMSSVNEVPAQPVYIDSFPKLRAWYFQNQACI
ASTLSGLCNKNPVHQVANKILSMICRKMNKGGVPSGNLSSTSSSSVSGSSVNASDDSFQR
LAVPAWEFLEAVPFVLEAVLTACAHGRLSSRDLTTSLRDLVDFLPASLAAIVSYFSAEIT
RGIWKPVPMNGIEWPSPGASLHSIEAEIKEILASAGVQIHSCYPRGVPPMLPLPMAALVS
LTITFKLDRSLDCIQGVIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCLRSP
FGRDKDAVAQLIQSCFSSFLLSSSGGSDITANRGVGALLGDSITNQGLRLPMAPGFIYLR
TCRTFHDTYFVSEVILKQVIEWSHKLANGWSFNGPPQLKSGRTPLSCAASMAHQVAMLGG
GLLCIAGGPLVVQVLYEETLPTLLLSAREQSLKDPGPVSSTLQGYAMANMLFFCGSLLWG
ADRISPVMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCNPGTWKAYVSRFVFLVVKFVP
SWLRDIKLDTLKKIAAGLRSWHEHDLALSLLERGGPQAISAVVETLL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgaaggcgtcagaggcgcgcggggacccgccgctgctgcgagcggtggag
ctggctcgcgtcgtcgccggggagggcgcggggatccccagcgccgacctggcggggatc
ctcgtctccaacctctgcttcgcgcacaactcaccctcgctctggaagctcgtcggccag
gccatggcctcccgcctcctctgcccgctccatgtgctcgcgctcctcacccccagggtc
ctcccgcagcggcgagcgcagcccgaggcgtatcggctctacttggagctcgtcaagtgt
aacatcacgtcctcctcgctgtctatggaggccgggcctaatcgtgacaagatcacaaag
tccatttctgatgctttgcaactatcaaagatttatggattttctggaacagaatttgga
catgttgtcattatgtttgtgttggctgttaccaccaaactgattgatagcatacttgag
gattgtggctttccgtctgggatggaagaggggcaagagagtgtatatgccatcgaaggg
ccacaacctatggacttagatgtcaaaagggtctctacagagaaccaaaatgagcatcgc
gaacagttacgcaggaagaacactgccatggccttggatgtattgcatatgatggttgct
gatagaaagattcagtcatttctgcgcttgatattcctgaacatgcctgaaaagttcagt
tctctaagccagaggttgagttctattgaagctcacaaggtggccttggagagactactg
ccttctggacacaaaattaatgacttgttaatagatatccggagagtttgtaatgcaaac
tatcaaccaaataacaaacgcattgtggatgttcttggtaatatgagatctggtggctcc
ctattgggccaacttactggagctgggagagctgcctgctggataatatttgatatttat
gtggaaaatgcaattgacgggaaacatctaagtggtatatcagctattgaggttttaaaa
gaaatgacgaagacactgcaagtacttaatgaggcaagctggcaggaaacatttaaagct
ctttggatttccgctcttcgtctcgtacagcgggctagagagcctcttgaaggaccaatt
cctcatctggatgcgaggttatgcatgttgttagctcttataccactatcagttgatgca
attcttaaagaggaaagtgatatatttggagctgaaggaagcaaaattcttccacgaaga
caagggttgatatcttctctccaggatctgatccagtattcaggacttcttgtaccacct
tcttcagtggtgaatgcagctaatgctgcagcctcgaaagcagcaatatttaaggctaat
tatacggctggggttgtcaactctagcatggtggcccagaccgactcttcgacgaaagtt
tcgatgaaagctgttgggaacatgctccatcttattattgaagcctgtatctcgagaaaa
ttgatggatacatctgcttacctatggcctggttatgttgtatcatctgggcctttgaaa
gatacaactttaccccaggaatccccttggttaaactttattaaaggggctccactttct
gatccacttattgatgctctcgtcgctactcctgcttcaagtgttggggaattggaaaaa
ttatacaatatagcagcaaatggttcagaagaagaaaaaacagctgctgcaaagattctt
tgcggcgcatcacttgtccgtggctggaacattcaggaacatgtggttggtatggtggtc
aagctattatcagcttctttgccctcagattcctcaatctcaacaactggaagcatgaac
cactaccttgcccagatgtctacgttaaatgaaatcttactcggtgtgtcttatggtgat
gccatccacattctttcgttatatggaatggttccagatgttgctgcagctttgatgcca
ctatgtgaagcttttgggtcaatagcacccccacctaaccacaagtctaccatccttggt
gaaacatctgtttattcagtcttctcttgtgcatttctttgtctccttcgcttgtggaag
ttttataagcctcctcaagagtactgtcttgctggtcgtggaggctcagtaaggctggaa
cttactctggactatctgttgttgatgcgcaataaccgcattgacctctcaaattcatct
gcccctagtagggattcttacaacaatatgagctcagtcaatgaggtccctgctcaaccg
gtgtatattgattcttttcccaagttaagggcttggtatttccagaatcaagcttgcata
gcctctaccctatctggtctttgcaacaaaaaccccgtccatcaagttgcaaacaaaatt
ttgagtatgatttgccgaaaaatgaataaaggtggggtaccatctggtaatctttcatcc
acttctagtagtagtgtcagtggttcctctgtaaatgcatcagatgattctttccaaagg
cttgctgttccagcatgggaatttttagaagctgttccttttgtccttgaagctgttctt
acagcatgtgctcatgggcggctttccagccgagacttgactacaagcttaagagattta
gtggactttttgcctgcttctcttgctgcgattgttagctacttctcagcagaaattaca
cgaggaatctggaaacctgtcccaatgaatggaattgaatggcctagccctggtgcttca
cttcattccattgaagctgaaataaaggaaattcttgcatctgctggtgttcagattcac
agctgctatccacgtggtgtgccaccaatgcttcctttaccaatggctgcacttgtcagc
ttgacaattacatttaagctagatagaagtttggattgcattcaaggagtcattggacaa
gcactagagaactgtgcaggggggagttcatggccgagcatgcccattattggggcattg
tggacccagaaagtgcgaagatggcatgactttatcgtcctctcttgtttgcgttctcca
ttcggcagagacaaagatgcagtggcgcagctcatccaaagttgcttttcgtcctttctg
ctgtcgtcatccggtggttctgacataactgcaaatcgtggagtcggggctttactagga
gactcgatcacaaatcaaggtcttaggctcccgatggcacctggtttcatctacctgaga
acgtgtcgaacattccacgacacttactttgtcagtgaagtgatcctcaagcaagtgatc
gagtggtcccacaaacttgcaaatggatggtcctttaatgggcctccacagttgaagtca
gggcggacaccactatcttgtgcagcatccatggcacatcaggtcgcaatgcttggtgga
gggctcctatgcattgcaggtggaccacttgtggtccaggtgttgtatgaggaaacattg
ccaacactgctgctatcagccagagaacagagtttgaaggaccctgggccagtttctagc
acactccaaggttatgccatggccaacatgctcttcttctgtggtagcctgctttgggga
gcagataggatttctcctgtcatgaaattgtctttcctctcaaggaggccgcgagttgtc
ggaacccacatggatttcatagctggtgtattggatggacacattcttcttggctgcaat
ccgggtacctggaaagcatatgtgtctcgctttgtgttcctggtggtgaagtttgtccca
tcatggttgcgggacataaaactggatacgctgaagaagatagcagctgggctccggagt
tggcatgaacatgaccttgctctatctcttcttgagcgagggggaccgcaagcaatctct
gctgtagttgagacgttgctgtga
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