Setaria viridis (green foxtail): 117845966
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Entry
117845966 CDS
T07951
Name
(RefSeq) tryptophan decarboxylase 2 isoform X1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00350
Tyrosine metabolism
svs00360
Phenylalanine metabolism
svs00380
Tryptophan metabolism
svs00950
Isoquinoline alkaloid biosynthesis
svs00965
Betalain biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
117845966
00360 Phenylalanine metabolism
117845966
00380 Tryptophan metabolism
117845966
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
117845966
00950 Isoquinoline alkaloid biosynthesis
117845966
00965 Betalain biosynthesis
117845966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117845966
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
117845966
4.1.1.105 L-tryptophan decarboxylase
117845966
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117845966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
SepSecS
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
Replicase
Motif
Other DBs
NCBI-GeneID:
117845966
NCBI-ProteinID:
XP_034582951
LinkDB
All DBs
Position
2:12537832..12548488
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AA seq
500 aa
AA seq
DB search
MDGSGSSNEGANGGGEWLRPMDAEQLRECGHRMVDFVADYYKSIETFPVLSQVQPGYLKE
LLPDTAPSKPDTLEALFDDIREKIVPGVTHWQSPNYFAYYPSNSSTAGFLGEMLSAAFNI
VGFSWITSPAATELEVIVLDWFAKMLNLPSQFLSSALGGGVIQGTASEAVLVVLLAARDR
TLRKHGKTSLEKLVVYASDQTHSSLQKACQIAGIFPENVRVVKADCNKNYAVAPEAIFEA
ISTDLSSVLIPFFICATVGTTSSSAVDPLPELGQIAKAHDMWLHVDAAYAGSACICPEYR
HHLNGIEEADSFNMNAHKWFLTNFDCSLLWVKDRSYLIQSLSTNPEYLKNKASQANSVLD
FKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRKHIGLAKYFEELVISDSRFEVVTPRT
FSLVCFRLLPLASDQDNGYKLNYGLMDAANSSGKIFISHTVLSGKFILRFVVGAPLTEEQ
HVFAAWKVLQDLATKQLGSS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacgggagcgggagcagcaatgaaggagccaacggcggcggcgagtggctgcggccg
atggacgcggagcagctgcgggagtgcggccaccggatggtggatttcgtcgccgattac
tacaaatccatcgagaccttccccgtcctcagccaagtccagccaggatatctgaaggaa
cttctaccagatactgctccaagcaaacctgatacgttggaggccctttttgatgatata
cgagagaagatagtgccaggagttacacattggcaaagtccaaactacttcgcctattat
ccttccaatagtagcactgctggcttccttggagagatgctgagtgctgcttttaacatt
gtcggattcagttggataacctctcctgctgcaactgagctagaggttattgtcttggat
tggtttgcaaaaatgcttaacctgccaagtcagttcctgtcaagtgcacttggtggaggt
gtaatccagggtactgccagtgaagcagttcttgttgtactcttggctgcacgggacaga
actttaaggaagcatgggaagacatctcttgaaaaactagtagtttatgcatcagatcag
acacattcttctctgcagaaggcatgccagattgctgggattttcccagagaatgtgaga
gtggtgaaggctgactgcaataaaaattatgctgttgcacctgaagccatttttgaggcc
atttccacagacttgtcatctgtcttgataccatttttcatctgcgcaacagttggcaca
acatcttcatcagctgtggaccccttgcctgagctaggacaaatagccaaggcccacgac
atgtggctccatgttgatgctgcctatgcaggaagtgcctgcatatgccccgaataccga
catcacttgaatggaattgaagaagcagattcatttaatatgaatgcacataaatggttt
ctgactaactttgattgttccttgctatgggtgaaggacagaagttatcttatacaatca
ttgtctacgaatccagagtatctcaagaataaggcgtcccaagcaaattctgttcttgat
ttcaaagactggcaaattccgcttggacgccgttttagatcacttaagttatggatggtc
ttgaggctttatggcgtggaaaacctgcaaagctatattagaaagcatatagggttagcc
aaatattttgaagaacttgtgatctctgattcaagattcgaggtagtgactccaaggacc
ttttcgcttgtttgtttccgccttctgcccctggcctctgaccaagacaatggttacaaa
ctaaactatggcctaatggatgctgctaactcaagcgggaagatcttcatatctcatacg
gtcctttctggcaagttcatcttgagatttgtagtaggagcgccactcacagaggagcaa
cacgtctttgctgcttggaaggttctgcaagatttggccactaaacagttaggaagttca
tag
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