Setaria viridis (green foxtail): 117848201
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Entry
117848201 CDS
T07951
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117848201
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117848201
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117848201
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117848201
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117848201
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117848201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
117848201
NCBI-ProteinID:
XP_034585422
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All DBs
Position
3:complement(46083070..46095930)
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AA seq
1122 aa
AA seq
DB search
MTMMTPPPLEQQQEDEEMLVPHQELPVAGPEPAPQPMEVVAQTEPANTAESQPAEDPQTS
RFTWTIESFSRLNTKKHYSDVFVVGGYKWRVLIFPKGNNVDHFSMYLDVADSGNLPYGWS
RYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVV
EAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIEQLFEGHHINYIECINVDYKSSRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPL
QLDLDRDEGKYLSPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDE
KDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKIARDEDLKDQIGKNIYFDLVDHEKV
RSFRIQKQLPFTSFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNRPLTAHEEAQSVGQL
REVSNKAHNAELKLFLEVELGPELRPIRPPEKSKEDILLFFKLYDAEKEELRFVGRLFVK
ALGKPSEILTKLNEMAGFSPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICF
QKAPVPDGDTQVRYPDVPSFLEYVHNRQVVHFRSLDKPKDDDFSLELSKLHTYDDVVEKV
AHQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPL
PELQCLKTLKVAFHHATKDEVVVHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVF
YHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQN
FGDPFLMVIREGETAAEVMERIQRKLRVPDEEFSKWKLAFISMNRPEYLQDTDVVSARFQ
RRDVYGAWEQYLGLEHTDTTSKRSYTANQNRHTYEKPVKIYN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacgccgccccctctcgagcagcagcaggaggacgaagagatgctcgtg
ccgcaccaggagctccccgtcgccggccccgaacccgccccgcagccgatggaagtcgtc
gcgcagacggagcccgccaacacggctgagagtcagccggcggaggacccgcagacgtcg
cgcttcacctggacgatcgagagcttcagccgcctcaacactaagaagcactactccgac
gtgtttgtcgtcggagggtataaatggcgtgtgctgatcttccccaaggggaacaatgtg
gatcacttctcgatgtatttggatgtcgcggattcggggaacctcccgtacgggtggagc
cgttatgctcagttcagcttggccgttgtgaaccaaatccatcccaagtatacgatacgg
aaagatacccagcaccaatttaatgcacgtgagagcgactggggtttcacatcatttatg
cctttgagtgacctgtatgacccaagcaggggctatcttgtgaatgacactgttgtagta
gaagctgaggtggctgtgcgaagaatggttgattattggacttacgattcgaaaaaagaa
acaggttatgtaggtctcaagaatcaaggtgctacctgttatatgaactctctcctacaa
acgttgtaccatataccatacttcagaaaggctgtatatcatatgccaacaactgagaat
gacatgccatctgggagtattcctctagcccttcagagccttttttacaagctccagtat
agtgacaacagtgtggctacgaaagagttgaccaaatcctttggatgggatacttatgat
tctttcatgcagcatgatgtgcaagagctcaacagagttctttgtgagaagcttgaagat
aagatgaagggaactgttgtggaaggaacaattgaacaattatttgaaggccaccacatt
aattatatcgagtgcatcaatgtggactataaatctagcagaaaagaatcattttatgat
ctgcaacttgatgtgaaaggttgtcgtgacgtttatgcatcatttgataaatatgtggaa
gtggagcgtttagagggtgataacaaatatcatgcggagcaatatggcttacaggatgca
aagaaaggtgtgctcttccttgatttccctcctgttttgcaacttcaactgaagcgtttt
gaatatgattacatgcgagatacaatggttaagattaatgaccgttatgagttcccgcta
caacttgatcttgatagagatgaaggaaaatatctttctccagatgcagatcgtagtatt
agaaacctttatacgcttcacagtgttcttgttcatagtggaggagtacatggtggtcac
tattatgctttcattcggccgacactctcagatcagtggtacaaatttgatgatgagcgg
gttacgaaagaagatacgaaaaaggcacttgaagagcagtatgggggtgaggaagagttg
cctcaaataaaccctggtttcaataacacgccgttcaagttcacaaagtattccaatgcc
tacatgcttgtctacattcgtgagagtgacaaggagaaaataatgtgtaatgttgatgag
aaggatattgcggagcatttgcggataaggttgaagaaagaacaagaagagaaagaacac
aagaaaaaggaaaaggctgaagcacacctctacactatcataaagattgctcgagatgaa
gatttaaaggatcagattggtaagaacatatattttgacctggtggaccacgaaaaagtt
cgcagcttccgcattcagaagcagttgccttttacttcattcaaggaggaagttgcaaag
gaatatggcatacctgtacagtttcagcgcttctggttgtgggctaagaggcagaaccat
acataccggccaaatcgtccgttgaccgcccatgaagaagcacaatcggtcgggcagctt
agggaagtctcaaataaggcacacaatgctgagttgaagctgttcctggaagttgaactt
ggaccggagttacgtccaattcgtccaccagagaagagcaaagaagacatactacttttc
ttcaagctttatgatgctgagaaggaagagctcaggtttgttggtagacttttcgtgaag
gctttgggaaagccatctgaaatattgacgaagctaaatgaaatggcagggttttctcca
aatgaagaaatagagctatacgaggaaattaagtttgagccaaatgtgatgtgtgaacat
attgacaagaaactaactttccgttctagtcagcttgaagatggagacatcatctgtttc
caaaaggctcctgttcctgatggtgatacacaagtgcgctatccagatgttccttcattc
ttggagtatgttcacaataggcaggttgtgcactttcggtctctggacaaacctaaggat
gatgatttttctttggaattgtcaaagcttcatacttatgatgatgttgttgagaaagtt
gcgcatcaacttggtttggatgatccatcaaagattcggcttacatctcacaattgttat
tctcagcaacctaaaccgcagcctatcagatatcggggagtagaacatctactggacatg
cttgtccattataatcagacttctgatatcttgtattatgaggttctggacattccattg
ccagaattgcagtgtttgaaaacacttaaagttgcattccatcatgcaacaaaagatgag
gttgtagttcatagcataagacttccaaagaatagcaccatcagcgacgtgattactgac
ttgaaaaccaaggttgaactgtctaatcctgatgctgagctccgcttgcttgaagtattt
taccacaagatttataagatctttccacctcatgagaagatagagaacataaatgatcag
tactggacactacgggctgaggagatcccagaggaagagaagaatcttggcccacatgat
cgattgattcatgtttaccatttcatgaaagaccctaatcagaatcagcagattcagaat
tttggagatccttttttgatggttatccgtgaaggtgagactgctgctgaggtaatggag
cgcatccaaagaaaacttagagtccccgatgaggaattctccaagtggaagcttgcattc
atatccatgaaccggccagagtacctccaggatactgatgttgtatctgcacgttttcag
aggagagacgtatacggtgcttgggaacaataccttggcttggagcacactgatacaaca
tcgaaaaggtcttacacagccaatcagaatcgtcacacctatgagaagcctgtgaaaatt
tataattga
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