Setaria viridis (green foxtail): 117848800
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Entry
117848800 CDS
T07951
Name
(RefSeq) beta-hexosaminidase 3-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00511
Other glycan degradation
svs00513
Various types of N-glycan biosynthesis
svs00520
Amino sugar and nucleotide sugar metabolism
svs00531
Glycosaminoglycan degradation
svs00600
Sphingolipid metabolism
svs00603
Glycosphingolipid biosynthesis - globo and isoglobo series
svs00604
Glycosphingolipid biosynthesis - ganglio series
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
117848800
09103 Lipid metabolism
00600 Sphingolipid metabolism
117848800
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
117848800
00531 Glycosaminoglycan degradation
117848800
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
117848800
00604 Glycosphingolipid biosynthesis - ganglio series
117848800
00511 Other glycan degradation
117848800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
svs03110
]
117848800
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
117848800
Chaperones and folding catalysts [BR:
svs03110
]
Intramolecular chaperones
Others
117848800
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
117848800
NCBI-ProteinID:
XP_034586235
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Position
3:complement(19514101..19519932)
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AA seq
548 aa
AA seq
DB search
MEPALRLLLVLMVFMPCTGDVNVWPMPKSVSNGKQTVFISKDLKMTVVGSNYSDEKAILR
DAFGRMVAVVEQDHVISESYEKSPVLVGMNVVVGSRDDEVLAVLLLMGTRTPVNFVLCVL
ILKIGLLQLNFGVDESYSLFVPSTGHPLYAQIEAKTVFGALHALETFSQLCSFDLESRQI
ILQSAPWSILDSPRFPYRGLLIDTSRHYLPVPVIKRVIDSMTYSKLNVLHWHVVDEQSFP
IEITSYPKLWNGAYSYSERYTKDDAIDIVQYAEKRGVNVLAEIDVPGHALSWGVGYPSLW
PSAICKEPLDVSNNFTFEVIDGILQDFSKIFKFKFIHLGGDEVNTSCWTTTPHIKEWLIL
NGMDETDAYRYFVLRAQKIARSYGYDIINWEEPFNNFGDKLDRNTVVHNWLGGTVAEKAV
AAGLRCIVSNQDKWYLDHLDATWEGFYMNEPLAKIYKPEQQRLILGGEVCMWGEQVDASD
IQQTIWPRAAAAAERLWTPIEKIATNTSMVAPRLARFRCLLNQRGVAAAPLVGYGRSAPS
DPGSCISQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggagccagctctgaggctgctgctggtgctcatggtgttcatgccctgcaccggagat
gtcaacgtgtggccaatgcccaaatcagtgagcaatggaaagcagacagtcttcatcagc
aaggacctcaagatgacagtggtggggagtaactactcagacgagaaggctatcctgagg
gatgcctttgggaggatggtggcagtagtggagcaggatcatgtcatcagtgaaagctat
gaaaagtcacctgtgctcgtcggcatgaatgtggttgtcggttcccgggacgatgaggta
ctggccgtactgcttctgatgggaaccaggactcctgttaattttgtgctatgcgttttg
attctgaagattggccttctgcagctcaacttcggggtggatgaatcatacagcctgttc
gtgccttcaactggacatccgttgtatgctcaaattgaggctaaaacagtttttggagca
cttcacgcattggagacttttagccaattgtgtagctttgatttggagtcgaggcaaatt
atacttcaatcggcaccttggagtatcctggactcacccagatttccttaccgagggctt
cttattgatacttcaagacattatcttcctgtacctgtaataaaaagggtgatcgattca
atgacctacagtaagttgaacgttcttcattggcatgttgtggatgagcagtcatttcca
attgagataacttcatacccaaaattatggaatggtgcatactcttattctgagagatat
acaaaggatgatgctatcgacattgtacagtatgctgaaaaacgaggtgtcaatgtcttg
gctgagattgatgttcctggccatgccctctcatggggtgtcggatatccctcattgtgg
ccatcagctatctgtaaagaaccacttgatgtcagcaacaacttcacattcgaagtgatt
gatgggattcttcaagattttagcaagattttcaagttcaagtttatccatttgggaggt
gatgaagtcaatacaagttgctggactaccacaccacacattaaagagtggttgattcta
aatggtatggatgagactgatgcctacagatattttgtattgagagctcaaaagatagca
agatcatatggctatgacatcattaactgggaagaaccgtttaacaattttggagacaag
ttggaccgtaacactgtggtgcataactggcttggaggtacagttgcagagaaagcggtt
gctgctggtctgagatgcattgtgagcaaccaggataagtggtacctagatcacctggat
gctacatgggaaggattttacatgaatgaaccactggcaaaaatctacaagccagaacag
cagaggttgatccttggtggtgaggtatgcatgtggggtgaacaagtagatgcatcagac
attcagcaaacaatttggccacgtgctgcagcagctgcagagcggctgtggacaccaatt
gagaagattgcaacgaacacaagtatggtcgctccaaggttggcacgcttcaggtgtttg
ctgaatcaaagaggggttgctgctgcaccgctagttggctacggccgttcagcgccttca
gatccagggtcctgtataagccagtag
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