Setaria viridis (green foxtail): 117848978
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Entry
117848978 CDS
T07951
Name
(RefSeq) autophagy-related protein 18d-like
KO
K22991
WD repeat-containing protein 45
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117848978
Membrane trafficking [BR:
svs04131
]
Autophagy
Other autophagy associated proteins
Others
117848978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
BCAS3_WD40
ANAPC4_WD40
Ge1_WD40
Mcl1_mid
Motif
Other DBs
NCBI-GeneID:
117848978
NCBI-ProteinID:
XP_034586482
LinkDB
All DBs
Position
3:6672359..6674572
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AA seq
386 aa
AA seq
DB search
MAHAAVAADDSTAVDTDDDNSFRLLSVSWNQDSSCFAAATTADFRVFSCAPFHEKLRRVH
PDGGGYAVVEMLFRSNIFALVAAGEAGRHRVELWDDSQGQSVYDIPGIRSAVRSVRVSRA
YLAVVLDRTVRVYRLTDPARPRWKIPTALNPRGLCCLSSHAGAPPVLACPGTARGQVRVE
HLGTKEQAATRLVAAHSSDIACMAMTPDGAVLATASVKGTLVRVFSTMDGTCLQEVRRGR
DQADIYSIALSPNVQWLAVCSDKGTLHVFSLRVRDVKKDTGGKQSAEASSVVQTNTASNA
RSSLSFMKGILPDYFSSEWSFAQFRLPETTRYVAAFGEQNTVMIIGMDGSFYRCSFDPVN
GKEMVRKEYFRFLKDKDSPPIRTLTK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgccgccgtagcagccgacgactccactgccgtcgacaccgacgacgacaac
agcttccggctgctgtcggtctcctggaaccaggacagcagctgcttcgcggcggcgacg
accgccgacttccgcgtcttcagctgcgccccgttccacgagaagctgcgccgcgtccac
cccgacggtggcgggtacgccgtcgtcgagatgctgttccgcagcaacatcttcgcgctg
gtcgccgccggcgaggccgggcggcacagggtcgagctctgggacgacagccagggccag
agcgtctacgacatccccggcatccgctccgccgtccgctccgtccgggtgtcgagggcc
tacctcgccgtcgtcctcgaccggacggtcagggtctaccgcctgaccgacccggcgcgg
ccgcgctggaagatcccgacggcgctcaacccgcgggggctctgctgcctgtcctcccac
gccggcgcgccgccggtgctggcctgccccgggacggcgcgcgggcaggtccgcgtcgag
cacctggggacgaaggagcaggcggcgacgaggctcgtcgccgcgcacagctcggacatc
gcgtgcatggcgatgaccccggacggggctgtcctggccacggccagcgtgaagggcacc
ctcgtcagggtgttcagcaccatggacgggacttgtttgcaggaggtgcgcagagggcgt
gaccaagctgacatatatagcattgcgctgtcgccgaatgtgcagtggttggcggtgtgc
agcgacaaaggaaccctgcatgttttcagcctgagggttagagatgtgaagaaagataca
ggcggcaagcaatctgcagaggcaagttcagtcgtgcaaacaaacactgcatccaatgca
agatcatccttgtccttcatgaaagggattctgccggattacttcagctcagaatggtca
ttcgcccagttccgtctaccagaaaccacacgctacgttgcagcatttggagaacaaaac
accgtcatgattatcgggatggatggaagtttctacagatgcagctttgaccccgtaaat
ggcaaggagatggtgcggaaggagtatttccggtttctcaaagataaggactctcctcca
attaggactttaacaaaatga
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