Setaria viridis (green foxtail): 117852353
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Entry
117852353 CDS
T07951
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117852353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117852353
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
117852353
DNA repair and recombination proteins [BR:
svs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117852353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Glyco_transf_15
Motif
Other DBs
NCBI-GeneID:
117852353
NCBI-ProteinID:
XP_034590297
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Position
4:complement(30631071..30634274)
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AA seq
418 aa
AA seq
DB search
MASMAGAPRVRSLNIAAPEVEARPVLVPGGNKARSGPANARKPSPKPLRKAEPAAAGPPE
KPAAAAAKEEEGAKRNAVGGGGGGAPKGASPVPSPRRTPPGPPPRRNDAPLLQPSLPLSS
SCSSDASAELVRTRAFTGKVEKSRSWSTAAPKQGKAVGKVAESKSAGVDFVAPVTPEAVE
GKRRCAWATPTTDPFYVTFHDEEWGVPVHDDRRLFELLVLSCALAELTWPEILKRRQLFR
EIFMDFDPPAVSKINEKKLVAPGSVALSLLSEQKLRAVLENARQILKIADEFGSFDRYCW
GFLNHKPIVSKFRYPRQVPVKSPKADIISKDMMRRGFRGVGPTVIYSFMQAAGLTNDHLV
SCFRFEECNATPTLCTRDINKANMKADLKKDEMTTKICCEEVGTNAEMPRTIDALIVS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatggccggggcgccgagggtccggtccctgaacatcgcggcgccggaggtg
gaggcgaggccggtgctggtgccgggaggcaacaaggccaggtcgggcccggcgaacgcc
cggaaaccgtcgcccaagccgctgcggaaggcggagccggcggcggcggggccgccggag
aagcctgcggccgccgcggccaaggaggaggagggcgccaagaggaatgccgtaggtggg
ggcggaggtggcgcgcccaagggtgcgtcccctgtgccttcgccacggcgcacgccgccg
gggccgccgccgaggaggaacgacgcgccgctgctgcagccgagcttgccgctcagctcg
tcttgctcctcggacgcctccgcggagttggtccgcacccgggctttcactgggaaggtg
gagaagagccggtcttggtcgacggctgcgccaaagcaagggaaggctgtgggtaaggtg
gcagagagcaagtcggccggtgtggattttgttgctccggtaacgccagaggctgtggaa
gggaagaggagatgcgcatgggcgactccaaccaccgatcctttctatgtcactttccat
gatgaggaatggggggttcctgtacatgatgacaggagattgtttgagctacttgtacta
tcttgtgcattggctgagcttacatggcccgaaattctcaagaggaggcaactttttagg
gaaattttcatggacttcgaccctcctgccgtctctaaaataaatgagaagaagcttgtg
gcacctggaagtgttgccctttctcttttgtcagagcaaaagctccgagctgtccttgag
aatgctcgccagatactaaagattgctgatgaatttgggtcctttgatcgatactgctgg
ggttttctgaaccacaagcctatagtaagcaagttccgctatccaagacaagttcctgtc
aagagtcccaaggcagatataatcagcaaagacatgatgcgaaggggatttcgtggtgtg
ggcccaactgtcatatattccttcatgcaggctgcagggctaacaaatgatcacctggtc
agttgcttccggttcgaagaatgcaatgccactccaactctttgcacgagagacatcaac
aaggcaaacatgaaggcagatctgaagaaagacgagatgacaacaaagatatgttgtgag
gaggttggcactaacgcagagatgccgaggacgattgatgcgcttatcgtttcatag
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