Setaria viridis (green foxtail): 117857987
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Entry
117857987 CDS
T07951
Name
(RefSeq) sphingosine kinase 2-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00600
Sphingolipid metabolism
svs01100
Metabolic pathways
svs04148
Efferocytosis
Module
svs_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117857987
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117857987
Enzymes [BR:
svs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
117857987
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GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
DUF596
NO_synthase
Motif
Other DBs
NCBI-GeneID:
117857987
NCBI-ProteinID:
XP_034596825
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Position
5:complement(38165218..38169462)
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AA seq
499 aa
AA seq
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MEDRAATASVRVDGAPAEATLGGGELRWRRATGGGGAGERALSLEREVLGVEARGKEVVV
RAFVAAGAGRATSCASGAGAGGKKGAGRRCRRDFVLEMADGEGAAAAWGERMRRCLDSFG
RPKRLFTFVNPFGGKKCAKKIYDAEIKPLFEAAGVSITVQETEYRGHAREVATSLDLAKY
DGIVCVSGDGVLVEVVNGILQRTDWEEAIKMPIGLIPAGTGNGMAKSLLHAASEKCSVSN
AVFAIIRGHKQSLDVCTILQGEKKFFSVLLMTWGLVADIDIESEKYRWIGSARLDFYAVV
RIMNLRKYCGNIHFVPAPGYEAYGEPIKQVKNFMVESLEQNGKSHPSSYPGPSVEFQASD
WRFVDGPFVAVWINNVPWAAEDIMAAPEAKFADGYMDAVILRDCPKADLLALLMKMSDGS
YVKSPYVTYLKVRSFKLSPGPLVGNPKKGGIIDVDGEVIARGEGTYGRSQHQDVMAYGPP
IQLTVHQALATVYCPNKIR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgcgccgccacggccagtgtccgcgtggacggcgcgccggcggaggcgacg
ctcgggggcggggagctacggtggcgccgcgcgaccggcggcggcggtgcgggggagcgg
gcgctgtcgctggagcgcgaggtgctcggggtcgaggcgagggggaaggaggtcgttgtg
agggccttcgttgcggcgggcgcgggcagggcgacgtcgtgcgcgtccggcgcgggcgcg
ggagggaagaagggagctgggaggcggtgcaggcgggacttcgtgctcgagatggccgac
ggcgagggcgccgccgcggcgtggggcgagaggatgagacgctgcctcgactcgttcggc
cggccgaagagactgttcactttcgtcaaccccttcggcggcaagaaatgcgcgaagaag
atctacgacgcggaaatcaagcctctgtttgaagctgcgggtgtgagcatcacagtgcaa
gagaccgagtaccggggacatgcccgggaggtggcgacttccctcgaccttgccaagtac
gacggcattgtctgcgttagcggcgacggtgtcctcgtggaggtagtgaacggaattctt
caacgaacagattgggaggaggcaataaagatgccaattgggctaattccagcgggtaca
ggaaatggcatggctaaatcactcctgcatgctgccagtgagaaatgctctgtttcaaat
gctgtatttgccattatcagaggtcacaagcagtccttagatgtctgtaccattttgcaa
ggggagaagaaattttttagtgtcttgctaatgacttggggtttggtggccgacatagat
attgagtctgagaaatacaggtggataggaagtgcacgcttggacttctatgccgtggtt
cgcataatgaacttgcgaaaatactgtggaaatattcacttcgtgcctgccccaggctat
gaggcatatggagaacccatcaagcaagtcaagaatttcatggtagagtctctggagcaa
aatggaaaatctcatccgtcttcttatccaggtccttcggtcgagttccaagcttcagac
tggagatttgttgatggtccatttgttgcagtttggataaacaacgtgccatgggctgcc
gaggatatcatggcagctcctgaggcaaagttcgcagatggctatatggatgcagtcata
ctcagagattgtccaaaggccgatcttttagctctactgatgaagatgagcgatgggagc
tatgtcaaatcaccttatgttacatatctcaaggtaagatcttttaaattatctccaggc
ccgcttgttgggaacccaaaaaagggtggcattatagacgtggacggtgaggtaattgct
agaggagaaggaacgtacggcagaagccaacatcaagatgtgatggcttatggtcctcct
attcagctgacagtgcaccaagcattggctactgtatattgccctaacaaaattcggtga
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