Setaria viridis (green foxtail): 117858097
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Entry
117858097 CDS
T07951
Name
(RefSeq) probable LRR receptor-like serine/threonine-protein kinase IRK
Organism
svs
Setaria viridis (green foxtail)
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Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRR_8
PK_Tyr_Ser-Thr
Pkinase
LRR_4
LRR_6
LRRNT_2
Kinase-like
ETRAMP
Motif
Other DBs
NCBI-GeneID:
117858097
NCBI-ProteinID:
XP_034596989
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Position
5:complement(39600759..39604636)
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AA seq
946 aa
AA seq
DB search
MAAACPPLLLAALLLAAAAATSALTDDVLALVVFKTGVSDPSGRLATWTEDDDRPCSWPG
VGCDARTGRVTSLSLPAASLSGRLPRALLRLDALLSLALPRNNLSGPVLPNLLAALPRLR
SLDLSSNRLAAPVPAQLFAQCRYIRAISLAHNQLSGYIPPAVTSCASLVSLNLSSNRLAG
PIPDGLWSLPSLRSLDLSGNELSGSVPGGFPRSSSLRQVDLSRNLLAGEIPVDVGEAALL
KSLDFGHNLFTGGLPESLRRLTGLQFLGAGGNALAGELPAWIGEMRALERLDLSGNRFAG
DISYTIANCKNLVEVDLSRNALTGELPWWVFGLPLQRVSVAGNQLHGWVKVPEDAAMALR
VLDLSRNAFSGEIPSRITAFAGLQSLNLSSNSLSGQLPAGIGGMRLLEVLDVSANRLDGT
VPPEIGGAVALRDLRMGRNSLTGGIPAQIGNCSSLVALDLSHNSLTGPIPSTMGNLTSLQ
VVNLSQNKLNGTLPVELSNLPSLHIFDVSHNMLTGDLPNSRFFNNIPDSFVMDNSGLCSS
RKNDSCSAVMPKPIVLNPNSSSNPSSQATSSAPSNKHHKKIILSISTLIAIAGGAAIAIG
VITISVLNRRVRARAAASRSAPATALSDDYLSQSPENDASSGKLVMFGKGSPEFSAGGHA
LLNKDCELGRGGFGAVYKTVLRDGQPVAIKKLTVSSLVKSKDDFERQVKMLSKVRHHNIV
ALRGFYWTSSLQLLIYDYLPGGNLHKQLHECTEDNSLSWMERFDIILGVARGLTYLHQHG
IIHYNLKSSNVLLDSNGEPKVGDYGLAKLLPMLDRYVLSSKIQSSLGYMAPEFACKTVKI
TEKCDVYGFGVLVLEVLTGRRPVEYLEDDVVVLCDLVRSTLEEGRPEDCIDPRLCGEFPM
DEALPIIKLGLVCTSQVPSNRPDMGEVVSILELVRSPQDSAEEELV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctgcccgcccctgctcctcgccgcgctgctcctcgcggcggccgcggcg
acgagcgcgctcaccgacgacgtgctcgcgctggtggtcttcaagacgggcgtctcggac
ccgtcgggccgcctggcgacgtggaccgaggacgacgaccgcccctgctcctggccgggc
gtcggctgcgacgcgcgcacgggccgcgtcacctcgctctcgctcccggcggcgtcgctc
tccggccgcctcccgcgcgcgctgctccgcctcgacgcgctcctctccctcgcgctcccg
cgcaacaacctctccggccccgtgctcccaaacctcctcgccgcgctcccgcggctccgc
tccctcgacctctcctccaaccgcctcgccgcgcccgtccccgcccagctcttcgcccaa
tgccgctacatccgcgccatctccctcgcgcacaatcagctctctggctacatcccgccc
gccgtcacgtcctgcgcctcgctcgtctccctcaacctctcgtccaaccgcctcgccggg
cccatccccgacggcctctggtcgctgccttcgctccgctctctcgacctctccggcaac
gagctctccgggagtgtgcctggcggattcccccggagcagctcgctacggcaggtggat
ttgagccgcaacctcctcgccggggagataccagtggatgtcggcgaggcggcgctgctc
aagtcactggattttgggcataacttgttcacgggcggtctgccggagtcgctccggagg
ctgaccgggctgcaattccttggcgccggcggcaatgcgcttgcaggggagctgccggcg
tggatcggcgaaatgcgggccctggagcggctcgacttgtctggcaaccgattcgccggc
gacatttcctacaccatcgccaactgcaagaaccttgtggaggtcgacctgagccgtaat
gcgctcaccggcgagcttccctggtgggtgttcggcctgccgctgcagcgcgtctcggtg
gccggcaaccagctgcacgggtgggtcaaggtgcccgaggacgctgcaatggcgcttcgt
gtgcttgacctgtcgaggaacgcgttctccggcgagatcccgtcgcggatcactgccttt
gcgggcttgcagtcactgaacctgtcctcgaattccttgtcggggcagctgccggccggc
attggtgggatgaggctcctcgaggtgctcgacgtgagcgctaaccgacttgacggaacc
gtgccgccggagattggcggcgcggtggcgctccgggacctccggatggggaggaattcg
ctcacgggaggcatccccgcacagattgggaactgtagctccctcgttgcactggatttg
tcacacaatagcctcacggggcctattcctagcaccatgggcaacttgaccagtctccag
gtggtcaatctctctcagaacaagctgaacggaaccctaccagtggagctatcaaatctg
cctagcctccacatctttgacgtctcccacaacatgctgacaggggatctgccaaatagc
cgcttctttaacaacatccctgactccttcgtcatggacaattctggtctttgtagctca
cggaagaatgattcatgcagtgctgttatgccaaagccgattgtgctcaatcccaactcc
tcatcaaatccctcatcgcaggctacatcgagtgcacctagcaacaagcatcacaagaaa
atcatactgagcatttccaccctcattgccattgcgggtggggctgccattgctatcgga
gtgatcaccatatctgtgctcaaccgccgtgtccgtgcccgtgctgctgcctcccgctca
gcacctgctactgcattgtctgatgattaccttagccagtccccggagaatgatgctagc
tccggtaagctagtcatgtttggtaagggcagccctgagttcagcgccggtgggcatgca
ttgttgaataaggattgtgagcttgggcgtggaggctttggtgcagtctacaagacagtt
ctcagagatggacagccggtagccatcaagaagcttactgtctctagcttggtcaagtcg
aaggatgatttcgagcggcaagtaaagatgcttagcaaggtgcggcaccacaatattgtt
gcgctcagaggcttttactggacttcatccttgcagcttctcatctatgattacctgcca
ggaggaaatttgcataaacagctgcatgagtgcactgaagataattcactttcctggatg
gagaggtttgatatcatccttggtgttgccagagggctgacatacttgcaccagcatggg
atcatccattacaatctcaagtcaagcaatgtgctgctggatagcaatggcgagccaaag
gtgggtgactatggcctcgccaagctgctgccgatgctggaccggtacgtgctgagcagt
aagatacagagctcacttgggtacatggccccagaattcgcatgcaagacggtgaagatc
accgagaagtgcgacgtctacggctttggtgtgcttgtgctggaggtcttgacaggcagg
aggcccgtcgagtacttggaagacgacgtcgttgtgctatgtgatctagtcagaagcacg
ctggaggaaggcagaccggaagactgcatcgacccgcggctatgcggcgagttccccatg
gacgaggccctgccgatcatcaagctgggcctcgtctgcacctcgcaggtgccatcgaac
cggcctgacatgggcgaggtggtgagcatactcgagctggtgaggagtcctcaggatagt
gcggaggaggagctggtttga
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