Setaria viridis (green foxtail): 117859324
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Entry
117859324 CDS
T07951
Name
(RefSeq) uncharacterized protein LOC117859324
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117859324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117859324
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
117859324
DNA repair and recombination proteins [BR:
svs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117859324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
117859324
NCBI-ProteinID:
XP_034598446
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All DBs
Position
5:38713395..38716008
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AA seq
374 aa
AA seq
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MCNSNVKSAGVAQIDGRPVLQPAGNRVAPPEGARPLKKSLHKSLSMPASFDNNAAAAAAR
PAPENTRAAAAASLLPPATPASVTARATKAAAAVAAEKSRVKARKPGAVLPVVTFAALEA
FEPAGSIAAAQREHAAQAQAQRKMRIAHYGRTASFSRVEGRVGATAAEPVPASPTGNDEK
RCSFITPYSDPLYVAYHDEEWGVPVHDDELLFEMLTLSGVQVGADWTSILKKRHVYREAF
SGFNVDAVAKYTEKQMALLSTDFGLDLGTVRGTVNNACRILEVRRDFGSLDKYVWAFVNN
KPLSPGYKYSRKIPVKTSKSESISKDMVRRGFRFVGPTVIHSFMQAVGLTNDHLVSCPRH
RACSTSAAAAGRAN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaactccaacgtcaagtccgcgggcgtcgcccagatcgacggccgcccggtgctg
cagccggcgggcaaccgcgtggcgccgccggagggggcgcgcccgctcaagaagtccctg
cacaagtcgctctccatgccggcctccttcgacaacaatgccgccgcggcggccgcgcga
cccgcgcccgagaacacccgcgccgccgcggcggcttccctgctgccgcctgcgacgccg
gcctcggtcaccgcgagggcgacgaaggcggcggcggccgtggccgcggagaagagcagg
gtcaaggccaggaagcccggcgcggtgctgccggtggtgacgttcgcagcgctggaggcg
ttcgagcccgcggggagcatcgcggcggcgcagcgggagcacgccgcgcaggcgcaggcg
cagcgcaagatgcgcatcgcgcactacggacgcaccgcgtccttctcccgtgtcgagggg
agggtcggcgccaccgccgcggagcccgtccccgcctcccccaccgggaacgacgagaag
cgctgcagcttcatcacgccctactcggaccccctgtatgtggcgtaccacgacgaggag
tggggagtgcccgtgcacgatgacgagttgctgttcgagatgctcaccctgtctggcgtg
caagtcggggcggattggacttccatcctcaagaaaagacacgtctacagggaggcgttc
tccggcttcaacgtggacgcggtcgccaagtacaccgagaagcagatggcgttgctgagc
accgacttcggcctggacttgggcaccgtcagagggaccgtcaacaacgcctgccggatt
ctcgaggtgcggagggactttgggtcgctggacaagtacgtgtgggcattcgtgaacaac
aagccgctgtcgccggggtacaagtacagccggaagatcccggtgaagacgtccaagtcg
gagtccatcagcaaggacatggtgcgccggggcttccgcttcgtcggccccaccgtcatc
cactccttcatgcaggccgtcgggctcacaaacgaccacctcgtctcctgcccacgccac
cgcgcctgctccacctccgccgccgccgccggccgcgctaactga
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