Setaria viridis (green foxtail): 117860155
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Entry
117860155 CDS
T07951
Name
(RefSeq) exocyst complex component SEC8
KO
K06111
exocyst complex component 4
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117860155
Membrane trafficking [BR:
svs04131
]
Exocytosis
Tethering complex
Exocyst complex
117860155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Sec8_C
EXOC6_Sec15_N
Vps54_N
Motif
Other DBs
NCBI-GeneID:
117860155
NCBI-ProteinID:
XP_034599288
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All DBs
Position
6:20027747..20045652
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AA seq
1056 aa
AA seq
DB search
MSRSGHRRGIFDGLPIPADKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQF
LKEQSDLIEDVVDEVVHAYHHGFNKAIQNYSQILRLFSESADSITGLKGEMAEAKKLLGR
KNKHLGQLWYRSLTLRHVLSLLDQVEDVAKVPARIENLMAEKQLYAAVQLHVQSMLMLER
EGLQAVGALQDVRSDLTKLRGVLFYKILEELHGHLYNNGEYSSVTLSMADSEDVPASTAA
GRVLNSMQPLSRRTRSIKGDNHISGAVAADGFPKTSSIDGGSSFDGPDDDSSLDMRESDG
RSRKDSKSISRQIPIFLSCAAPDEFIDSMIKADAPLNVKYLRTLVQCLSMLGKVAAAGAV
ICQRVRPTIHDVITSKIKAYSEEASKSSTDKAAKRTSDASHSDGPIPRFQMLKQKTKNGA
SVMAAQLVVSPISPAMAPTGDAQRAATQLLRSIFECLLDILENHIIVGDLLEQKSTSEVD
NINTPHIVNGDASWNPDSESSQATGGFSVAFSLSVVQSECQQLLCEILRATPEAATADAA
VQTARLANKDPVKEKRDGSEGLSFAFRITDSATSVPNEGQGWRRNSNVPQEGYGTASVIP
DQGIFLAASVYRPVFEFMNKIGSMLPQKYSQLGSDGLLAFVDNFLKEHFLPAIFVDYRKC
VQQAISSPAAFRPRVHATSVYDSLVELGRPVLQGLLAVDIIAKEVLGWVQLMPNYATELV
EYVRTFLERTHERCRASYMEAVLEKQSYILLSRNDVESLMRLEPANIYLQNSTSQPDNNV
TDAEAVEVEIELSDLLLDMCPIKQENLIHDDQKLILLASLSDSLEYLADSVERLGESFIS
PPTANHSQHGQHTRSSSAIPKGLASLANEYRRLAIDCVRVLRLEMQLEAVYQMQEMTKRE
YIEDQDAEDPDDFIISLTTQIARRDEEMAPYITESKRNYVFGGISSVAANASIKALAQMK
SINLLGVQQICRNSIALEQALAAIPSIDSEAVQQRLDRVRTFYELLNLPFESLLGFIAEH
EYLFSAKEYLSVLKVNVPGREIPMDAERRISQILGH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagcggtcaccgccgcggcatcttcgatggcctccctattccggccgacaaa
tcctacctcaaggaaggattgtcgcggatcgatgaggggtgggcggccgcgcggttcgac
tcgctgccgcatgttgtgcacatcctcacttccaaggaccgcgacggcgagatccagttc
ctcaaggagcagagcgatctcattgaggacgtcgttgacgaggtcgtgcacgcctaccac
cacggcttcaacaaggccatccagaactactcccagatcctacggttgttcagcgagtct
gcggatagcattactggacttaagggagagatggcagaggccaagaagctgcttggcagg
aagaataagcacctcggccagctgtggtaccggtccctcacactacgccatgtcctctct
cttttggatcaggttgaggatgttgccaaggttcctgctcggatcgaaaacttaatggca
gagaagcagctgtatgctgcagtacagttgcatgtccaatcaatgctgatgctagaacga
gaaggccttcaagcggtaggtgctcttcaagatgttcgttctgacctcacaaagctgcga
ggtgtactgttttacaaaattttggaagagttgcatggccatttgtacaacaatggagaa
tatagctctgtgactttgagcatggctgacagtgaggacgtaccagcttctacagctgct
gggcgtgtattaaatagcatgcaacctctttcaaggagaactaggtcaattaaaggtgac
aatcacattagtggagcagtggctgcagatgggtttccaaaaactagttctattgatgga
ggctcttcatttgatggcccggatgatgatagtagcttagacatgcgtgaaagtgatgga
cgctctcggaaggattcgaaaagtatttctcgtcaaatcccaatttttctttcctgtgcg
gcaccagatgagttcattgattcaatgatcaaggcagatgccccccttaatgtgaaatac
ttgagaacattggtacaatgcttatccatgcttggaaaggttgcagctgcaggagctgtg
atatgccaacgagtacgccctacaatccatgatgttatcacttcaaagattaaagcctat
tctgaagaggcttcaaaatccagcacagataaagctgcaaaaagaacatctgatgcgtca
cattcagatggacccattccccggttccagatgctcaaacagaaaacaaagaatggtgca
tctgtaatggcagcgcaacttgttgtcagtcccatttccccagctatggcacccacagga
gatgctcagcgtgcagctactcaacttcttagatcaatatttgaatgtcttttagacata
cttgagaatcatattattgttggagatcttcttgaacaaaagtcaacatctgaggttgac
aacataaacacacctcatattgtaaatggggatgcaagctggaatcctgactccgaatct
tcccaagctactggtggttttagtgttgcattctcactatcagttgtgcagagtgagtgc
cagcaacttctttgtgaaattttgagggcaactccagaagctgctactgctgatgcagct
gtccagacagctagacttgcaaataaggacccagtgaaggaaaagagggatggatcggaa
ggcctttctttcgctttccgcattactgattcagcaacctcagtgccaaatgaaggtcaa
ggatggcgaagaaattcaaatgtgccacaagaaggttatggaacagcaagtgtcatacct
gaccaaggaattttcctagccgcgtcagtttaccgtcctgtttttgagtttatgaataaa
ataggatcgatgttgcctcagaagtactcacaacttgggagtgatggcttattggctttt
gtagataactttttgaaggagcacttcttgccagcaatatttgtagattaccgaaaatgt
gttcagcaggccatatccagcccagcagcatttagaccacgtgtacatgcaacctcagta
tatgattcattggtggaacttggacgtcctgtgctacaagggcttctagcagttgatatt
atagctaaagaggttcttggatgggttcaattaatgccaaactatgcgactgagcttgtg
gagtatgtacgcacatttttagaacgtactcatgaaagatgtcgtgcatcatatatggag
gctgtccttgaaaagcaaagttatattcttctttcaaggaatgatgttgaaagtttaatg
cgcctggaaccagcaaacatttatttgcaaaattctactagtcagcctgataacaatgtt
actgatgcagaggcagtcgaagtagagattgaactaagtgatctcttattagatatgtgc
ccaataaagcaggaaaacttgatacatgatgaccagaaactgatattgttggcttctctt
agtgactctttggaatatttagctgattcagttgaaaggcttggggaatcattcataagt
ccaccaaccgccaatcacagccagcatggtcaacatacccgctcatctagtgcaattcca
aaaggtcttgcatctctggctaatgagtacagaaggctagctattgattgtgtcagagta
ttgagattggaaatgcaactagaggccgtatatcagatgcaggaaatgaccaaaagagaa
tacatcgaagatcaagatgctgaagatcctgatgactttattatctccctcacaactcag
atcgcacgtcgggatgaagaaatggctccttatatcacagaatcaaaaaggaattatgta
tttggtgggatttccagtgttgctgctaatgcgtcaataaaggcacttgctcaaatgaag
tcaatcaacttgttaggagttcagcaaatatgcaggaattcgatagctctagaacaggct
cttgcggccataccgtcaatagatagtgaagcagtccaacaaagattggatcgcgttcga
acattctatgagttattaaatttgcctttcgagtctttgcttggattcatcgccgaacat
gaatatttattttccgcaaaagaatacttgagtgttctgaaggtcaatgtgcccggtagg
gagatacctatggatgctgaacgacgcatctcacagattttgggtcactag
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