Setaria viridis (green foxtail): 117861090
Help
Entry
117861090 CDS
T07951
Name
(RefSeq) glutamate decarboxylase-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00250
Alanine, aspartate and glutamate metabolism
svs00410
beta-Alanine metabolism
svs00430
Taurine and hypotaurine metabolism
svs00650
Butanoate metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117861090
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
117861090
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
117861090
00430 Taurine and hypotaurine metabolism
117861090
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
117861090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
117861090
NCBI-ProteinID:
XP_034600464
LinkDB
All DBs
Position
6:complement(30346603..30352182)
Genome browser
AA seq
498 aa
AA seq
DB search
MVVTVAATGPGTDAEPVSSTFFASRYVRDPLPRYRMPDRSIPREAAFQIINDELMLDGNP
RLNLASFVTTWMEPECDKLIMGSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIKEDE
TAVGVGTVGSSEAIMLAGLAFKRKWQNRRKEQGKSYDKPNIVTGANVQVCWEKFARYFEV
ELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLTKKNKETG
LDVPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDL
PEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMQNCKANAAVLRE
GVAATGRFDILSKETGVPLVAFSLKDSNHFSVFDISENLRRFGWIVPAYTMPADAEHVAV
LRVVIREDFSRSLSERLVNDIQKILRELDARATHAVRVSSATAAQSDDGVVAKKSVLEIE
REVAARWRNAVNKKTGPC
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggtggttaccgtggcggcgaccgggcccggcacggacgccgagccggtgagctccacc
ttcttcgcgtcccgctacgtccgcgacccgctcccacggtaccggatgccggatcggtcg
atcccgcgggaggcggcgttccagatcatcaacgacgagctgatgctggacggcaacccg
cgcctgaacctcgcctccttcgtcaccacctggatggagcccgagtgcgacaagctcatc
atgggatccatcaacaagaactacgtcgacatggacgagtacccagtcaccacagagctc
cagaaccgttgcgtaaatatgatagctcacctgttcaatgcaccgattaaggaggatgag
acggctgttggagttggaacagtgggatcctcagaagcaattatgcttgcaggcctagca
ttcaagaggaaatggcaaaacaggaggaaggaacaggggaagtcatatgacaaacccaac
attgtcactggtgctaatgttcaggtttgctgggagaaatttgcaagatattttgaagta
gagctaaaggaggttaagttatcggaaggatattatgtcatggaccctgtcaaggccgtt
gagatggtggatgagaacactatatgtgttgcggccatcttgggatctactctcaccggg
gagtttgaagatgttaagctattgaatgaccttcttacaaagaagaacaaggaaactggg
ttggatgtgccgattcatgttgacgctgcgagcggaggattcatagcgcctttcctctac
cctgagcttgaatgggacttcaggctaccgctagtgaagagcatcaatgtcagtgggcac
aaatatgggcttgtctacgctggtgttggttgggtaatttggaggagcaaggaagatttg
cctgaagagctcattttccatataaactacctagggacagaccagcctacattcacgctc
aacttctctaaaggttctagtcagatcattgcacaatactatcagctcattcgcctaggc
ttcgaggggtacaagaacataatgcagaactgcaaggcgaacgctgccgttctgcgggaa
ggcgtcgcggcgactggccggttcgacatcctctccaaggagaccggcgtgccgctggtc
gccttctctctcaaggacagcaaccatttcagcgtgttcgacatctccgagaacctgcgg
cggttcggctggatcgttccggcgtacaccatgccggccgacgcggagcacgtggcggtg
ctccgcgtcgtcatcagggaggacttcagccggagcctctccgagcggctcgtgaacgac
atccagaagatcctgcgcgagctggacgcccgcgccacccacgccgtgcgggtctccagc
gccaccgccgcgcagtcggacgacggcgtcgtggccaagaagagcgtcctagagatcgag
cgggaggtcgccgcgcggtggaggaacgccgtgaacaagaagaccggaccgtgctga
DBGET
integrated database retrieval system
