Setaria viridis (green foxtail): 117861222
Help
Entry
117861222 CDS
T07951
Name
(RefSeq) homeobox-leucine zipper protein ROC7-like
Organism
svs
Setaria viridis (green foxtail)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
Homeodomain
Homeobox_KN
HTH_Tnp_1
MRP-L20
Motif
Other DBs
NCBI-GeneID:
117861222
NCBI-ProteinID:
XP_034600636
LinkDB
All DBs
Position
6:6556710..6561805
Genome browser
AA seq
793 aa
AA seq
DB search
MPGGMMIPGRNMPTAAAMIGGLASYAASLGQNMMDGQHQLAVMQQQQHQNHGQQQQPVTS
ESDMHGSRHDELLMESKSGSDNMEGGAGSGSGGEELQEEDLSLQQPRKKRYHRHTQHQIQ
ELEAFFKEFPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERQENTQLRAENEK
LRAENARYKDALANAACPNCGGPATAVIGEMSFDEHHLRIENARLHDEIDRISAIAAKYV
GKPVASLLPNSSNISSVVATAAPYPQPLSTHHIIPGAADMFGGLHHRGAAAGFDKPLVIE
LAVAAMEELVRMAQLGEPLWVPALVDGAATETLNEEEYAHGFPRGVGPKSPELHSEASRE
TVVVIMNHVNLVEMLMDVNQWSTLFSSIVSRAATLEVLSTGVAGNYNGALQLMTAEFQVP
SPLVPTRESQFVRYCKQHTDGSWAVVDVSLDGLRAGGAVGLRGRRRPSGCLIREMPNGYS
RVTWVEHVETDDAMVHDLYRPLVSSGLAFGAQRWAAALERQCERLASAMASGVPAASTGG
DTAGVVNSAEGRRSMLRLAERMVASFCGGVTASTTHQWTTLSGSGPEDVRVMTRKSVDDP
GRPPGIILNAATSFWLPVPPARVFGFLRDDATRSEWDILSNGGDVQEMAHIANGRDHGNA
VSLLRVNNANSNQSNMLILQECCTDKTGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGF
AILPDGPGAGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAALAADNT
TGGGARPPPYGDE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgggatgatgatccccggccggaacatgccgacggcggcggccatgatcggc
ggcctcgccagctacgccgcctccctcggccagaacatgatggatgggcagcatcaactt
gcggtgatgcagcagcagcagcatcagaaccatggccaacagcagcaacctgtcacgagc
gagagtgacatgcatggctcacgccacgatgagctgctgatggagagcaagtccggcagc
gacaacatggagggcggtgccgggtcaggctctggtggcgaagagctgcaggaggaggac
ctcagcttgcagcagccccgcaagaagcgctaccaccgccacacccagcaccagatccag
gagctcgaagcgttcttcaaggagttcccacaccctgacgacaaacagaggaaagagctg
agccgggagctgggcctggagcctctgcaggtaaagttttggttccagaacaagcgcacc
cagatgaagacgcagcaggagcggcaggagaacacacagctgcgggctgagaacgagaag
ctacgtgctgagaacgcacgctacaaggacgcacttgccaatgctgcctgccccaactgt
ggcggccctgccacagctgtcattggtgagatgtccttcgatgagcaccacctccgcatt
gagaacgcgcgcctccacgatgagatcgatcgtatctctgccattgccgccaagtacgtt
ggaaagcccgtcgccagcctgctgcccaactcatcaaacatctcctccgttgttgctact
gccgcaccttacccgcagccgctctccacccaccacatcatccctggagcagcggacatg
tttggcggcctccaccatcgtggagctgcagcagggtttgacaagcctctggtgatcgag
cttgctgtggccgccatggaggagctggtccggatggcccagcttggcgagccgctctgg
gtccctgccctggttgacggcgctgccactgaaactctcaatgaagaggagtatgctcat
gggttccccaggggtgtggggcccaagtcaccggaactccactcggaggcctcacgggag
actgtcgttgtcatcatgaaccatgtcaacctcgtcgagatgctcatggatgtgaaccag
tggtcgacattgttctcaagcatcgtgtcgcgggctgccacgcttgaggtgctgtccact
ggtgtcgctggcaactacaatggcgcactgcagctgatgacagcggagttccaggtgccg
tcaccgctggtgccgacccgtgagagccagtttgtgcgctattgcaagcagcacacggac
ggcagctgggcagtggtggatgtgtcccttgacggcctgcgtgcaggtggtgcagtgggc
ttgcgtgggcgccgccgcccctcaggctgcctgatccgagagatgccaaatggctactcc
cgcgtgacatgggtggagcatgtggagaccgatgacgcgatggtgcatgacctttaccgt
ccactggtgagctctgggctggcgttcggcgcgcagcggtgggcagctgcactggagagg
cagtgcgagcgccttgccagcgccatggccagcggtgtccctgcagcatccacaggaggt
gataccgcaggcgtggtgaactcagctgagggacgccggagcatgctccggcttgcagag
cggatggtagcaagcttctgtggtggcgtgactgcatcaacaacgcaccagtggacgacg
ctgtcggggagtggccctgaggacgtgcgcgtgatgacacgcaagagtgtagatgaccct
ggccgccctcccggcatcatcctcaacgcagccacctccttctggctccctgtgccgccc
gcacgcgtcttcggcttcctccgcgatgacgccacccgcagtgagtgggacatcctgtcc
aatggcggcgacgtgcaggagatggcgcacatcgccaacggccgagaccacggcaacgct
gtctcactgctccgtgtcaataacgccaactcgaaccagagcaacatgctgatcctgcag
gagtgctgcaccgacaagacaggttcctacgtgatctatgctcccgtggacgtggtggcc
atgaatgtggtgctcaacggcggggacccagactacgtggcgctgctgccatcgggcttc
gccatcctgcccgacggtcctggtgcgggcggcggtgggtctctcctgaccgtggcgttc
cagatccttgtggactccgtgcccaccgccaagctctccctgggctccgtcgccaccgtc
aacagcctcatcgcctgcaccgtcgagcgtatcaaggccgccctcgctgccgacaacact
accggcggtggcgcccgaccaccaccctatggtgatgaatga
DBGET
integrated database retrieval system
