Setaria viridis (green foxtail): 117864082
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Entry
117864082 CDS
T07951
Name
(RefSeq) malate synthase, glyoxysomal isoform X1
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00620
Pyruvate metabolism
svs00630
Glyoxylate and dicarboxylate metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
Module
svs_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
117864082
00630 Glyoxylate and dicarboxylate metabolism
117864082
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
117864082
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GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
Motif
Other DBs
NCBI-GeneID:
117864082
NCBI-ProteinID:
XP_034603964
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Position
7:complement(22410463..22414105)
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AA seq
572 aa
AA seq
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MCASVTAAAPCYDAPEGVDVRGRYDPAFASVLTRDALAFVAALQREFRGAVRYAMEQRRE
AQRRYDAGELPRFDPATRSVREGGWKCAPVPPAVADRTVEITGPAEPRKMVINALNSGAK
VFMADFEDALSPTWENLMHGQVNLRDAVAGTISFRDAARGREYKLNDRTAKLFVRPRGWH
LPEAHVLIDGEPAIGCLVDFGLYFFHNHAAFRAGQGAGFGPFFYLPKMEHSREARIWNGV
FERAEQAAGIERGSIRATVLVETLPAAFQMDEILYELRDHSAGLNCGRWDYIFSYVKTFR
AHPDRLLPDRALVGMAQHFMRSYSHLLIRTCHRRGVHAMGGMAAQIPIKDDAAANEAALE
LVRKDKLREVRAGHDGTWAAHPGLIPAIREVFEGHLGGKPNQIAGAAGQEEAMGAGITAE
DLIQPPRGGRTVDGLRLNTRVGVQYLAAWLSGSGSVPLYNLMEDAATAEISRVQNWQWLR
HGAELDAAGVPVRATPELLARVLEEEMARVEAEVGTERFRQGRYAEAGRIFGRQCTAPEL
DDFLTLDAYNLIVVHHPGGELRIFVLRRKVVT
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcaagcgtcacggcggcggcgccatgctacgacgcgccggagggcgtggacgtc
cggggccggtacgacccggcgttcgcgtccgtcctgacccgcgacgcgctggccttcgtg
gcggcgctccagcgcgagttccgcggcgccgtccggtacgccatggagcagcggcgggag
gcccagcggcggtacgacgccggcgagctgccgcggttcgacccggccacgaggtccgtc
cgggaggggggatggaagtgcgcgcccgtgccgccggccgtcgcggaccgcaccgtcgag
atcacgggccccgccgagccccggaagatggtcatcaacgcgctcaactccggcgccaag
gtcttcatggctgacttcgaggatgcactgtcgccgacgtgggagaacctgatgcacggg
caggtgaacctgcgggacgccgtggccggcaccatcagcttccgcgacgcggcgcgcggc
cgggagtacaagctcaacgaccggacagccaagctcttcgtccggccccgcggttggcac
ctccccgaggcgcacgtcctcatcgacggcgagccggccatcggttgcctcgtcgacttc
ggcctctacttcttccacaaccacgccgccttccgcgccggccagggcgccgggttcggc
cccttcttctacctccccaagatggagcactccagggaagcgaggatatggaacggcgtg
ttcgagagggcggagcaggcggccgggatcgagaggggaagcatacgggcgacggtgctc
gtggagacgctgccggcagcgttccagatggacgagatcctgtacgagctgcgcgaccac
tcggcggggctcaactgcggccgctgggactacatcttcagctacgtcaagacgttccgc
gcccacccggaccgcctcctccccgaccgcgccctcgtcggcatggcccagcacttcatg
cgctcctactcccacctcctcatccgcacctgccaccgtcgcggcgtccacgccatgggc
ggcatggcggctcagatcccgatcaaggacgacgcggcggcgaacgaggcggcgctggag
ctggtgcgcaaggacaagctgcgggaggtgcgcgcggggcacgacggcacgtgggcggcg
cacccggggctcatcccagcgatccgggaggtcttcgagggccaccttggcgggaagccg
aaccagatcgccggcgccgcggggcaggaggaggcgatgggcgccggcatcacggcggag
gacctcatccagccgccgcggggcgggcgcacggtggacgggctgcggctcaacacccgc
gtgggcgtgcagtacctcgcggcgtggctgtccgggtcgggctccgtgccgctctacaac
ctgatggaggacgcggccaccgcggagatcagccgcgtccagaactggcagtggctgcgg
cacggcgcggagctggacgcggccggcgtcccggtgcgcgccacgccggagctgctggcg
cgcgtcctcgaggaggagatggccagggtggaggcggaggtgggcaccgagaggttccgg
caggggcggtacgccgaggccgggaggatcttcggccggcagtgcaccgcgccggagctg
gacgacttcctgacgctggacgcgtataacctcatcgtcgtgcaccatcccggaggagag
ctgcgtatctttgtattaagaagaaaggttgtaacataa
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