Streptomyces violaceoruber: B1H20_17640
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Entry
B1H20_17640 CDS
T05124
Name
(GenBank) PAS domain S-box protein
Organism
svu
Streptomyces violaceoruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
PAS_7
HisKA
PKK
Motif
Other DBs
NCBI-ProteinID:
ARF63011
UniProt:
A0A1V0UCZ4
LinkDB
All DBs
Position
complement(4034965..4039473)
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AA seq
1502 aa
AA seq
DB search
MSSRPSRGTARLAAILDALPDGLLLVNCNGTVVNANAIALEMFETPGAALVGRGLLDLLP
EFDSRLIPGSMRRPETTDEHGRTKPARMTARRTDRHEYPVEVTSASLDSGQAAYNDIHSS
YTGDELLMIVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRVVLVNPAAAQ
ILGFRASDLGGQELHPLILHSRAEGEPFPYEESPLADTLKSGRKHRVRGQVLWSKSGARV
PVDLTTAPVRDGDQLVGAVMTFTDRRPYEELSAQHRSVVAELTASHDAEVTALKEAHTAE
LEALKEAHTAELADRSERYAAEIEGQAELLASLGAQHAQLTAVLGRSLRGPLEELRGELS
ALASDPAGQLWPEANQILHHLAAGYARMTTLVDNVLGFQRLDAGVEGLHKAPALVEGIVK
GGIDGAVELIGPGRAQFAVHAPPIEAEVDARQLATAIAHLVADVCGVDATGKARAVPGGG
YVDTTVVVAAAQRGDAVRIEVRGPYAGGDPVHEPLVRGIVRAHGGVLQTHEMPGMSGSAY
VLDVPIGAASGAIAPPVADGAGPAPEPAAAPVASSPSEGVGAPGVTSGGRRRARRSSTDA
FLDGPGGTAESIGDDATGAVPASPDDRPDAEPTGRRRARRGPAASEEQAPELIPAQQGEG
SGRRRGRPSPAEAAPAPGTAAEGPAAAAPEQREAQPRRSALALAPAPSASSGPSAHPGSA
GPSASAGSSASAEPSPPAGPSGGAAVTGAGNARSTGRPELGPPVPPQGAPADPQQAVPSL
GVPTGPQQPVPPRGVTAGPQQPVPPQGLPVDPVDPQQPVPPTGRRARREGENLALPALAS
GSGGAPEDRPGQEPSAPGPQQPGGRRARRALAAAQERAAADAGPRTAFALPPADADRSPG
APDAPAGPDHGTSAHHARTAPEAGYTPPQAHPIAPPNLAPQPNGAPAQGTPAHGTARHGA
PAAPHTVGTPQQPGSPTPAAGTPGTGEPATPGAAPDHAAWGDDAQGTRTGGEHSPRTGVG
PTAHATGTASVAEPAGHPADGDAGAPGARRQPLPAEEPMPEGVHPDSTQGRAFSVRTLGQ
GVPFAQHLAHQQNQPYQGVGGAGRRRKLAAPPEDDRAPARPGGGQQAPDLRPGIGRPAPN
QGAGAQQPGARQEQPGGATAPASARGTGQNPDQPGQDKAQGPFPAQEPTAPARPGQPGQN
AATGTGTAYGEGQLIAAPFAEGRAYAIGAPDEGAEGPEPLDGPGGAVEVANRPHPQPMDD
ELPPEPLDNPRRLLVWPAPDVPTQQALSDRGYRPVIVNSREEVDAQIAAFPAALFVDPLT
GPITRTALQSLRQAAVAAEVPVLVTAGLGQATREAAYGADPAVLLKALAPRDSEQHPPRV
LLIEEHEEIAAALTQTLERRGMQVARAAADSEAVELAGRMRPNLVVMDLMQVRRRRAGII
DWLRANGQLNRTPLVVYTSAGMDPAELPRLESGETVLFLAERSTSDEVQSRIVDLLAKIG
TN
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccgtcccgaggcactgctcgcctcgcagccatactcgatgccctcccc
gacgggctgctgctcgtcaactgcaacggcaccgtcgtcaacgccaatgccatcgccctc
gaaatgttcgagacgccgggcgccgcgctcgtcggtcgcgggctgctcgatctgctgccg
gagttcgactcccggctgatcccgggctcgatgcgccgccccgagaccacggacgagcac
ggcaggaccaagccggcgcggatgaccgcgcggcgtacggaccgccacgagtacccggtc
gaggtcaccagcgcgagcctcgacagcggccaggccgcgtacaacgacatccactccagc
tacaccggcgacgagctcctcatgatcgtcgtaagggacctctccggcaccgtggacacc
gaggcggagctggcccgttcgcagcggcagaccgagatgatcctgcgggccgcttccgag
ggcgtcgtcggcacggacaccgacgggcgcgtcgtcctcgtcaaccccgccgccgcgcag
atcctcggcttccgggccagcgatctcggcggacaggagctgcacccgctgatcctgcac
tcgcgggcggagggcgaaccgttcccttacgaggagtccccgctcgccgacaccctcaag
tcggggcgcaagcaccgggtgcgcgggcaggtgctgtggtccaagagcggcgcacgggtc
ccggtggacctgacgacggcgccggtacgggacggggaccagctcgtcggagcggtgatg
acgttcaccgaccggcgtccgtacgaggagttgtcggcgcagcacaggagcgtcgtcgcc
gagttgaccgcgagccacgacgccgaggtcaccgcgctcaaggaggcgcacaccgccgag
ctggaggcgctgaaggaggcgcacaccgccgagctcgccgaccggagtgaacggtacgcc
gcggagatcgagggccaggccgagctgctggcgtccctgggtgcccagcacgcccagctc
acggccgtcctcgggcgttcgctgcgcgggccgctggaggagctgcgcggcgagctgtcc
gcgctcgcctccgacccggccggtcagctgtggcccgaggccaaccagatcctgcaccac
ctcgccgccgggtacgcccggatgaccacgctcgtcgacaacgtcctgggcttccagcgc
ctggacgcgggcgtggaggggctgcacaaggcccccgccctggtcgaggggatcgtgaag
ggcggcatcgacggcgcggtcgagctgatcggtccgggacgcgcccagttcgccgtgcac
gccccgccgatcgaggccgaggtcgacgcgcgtcagctggccaccgccatcgcccacctc
gtcgcggacgtctgcggcgtcgacgccacgggcaaggcgcgggccgtccccgggggcgga
tacgtcgacaccaccgtcgtcgtggccgccgcccagcgcggggacgccgtacgcatcgag
gtgcgcgggccctacgcgggtggcgacccggtgcacgagccgctcgtgcgcggcatcgtc
cgggcgcacggcggggtgctccagacccacgagatgccggggatgagcggcagcgcgtac
gtcctcgacgtgcccatcggcgcggcgtccggcgcgatcgcgcccccggtggcggacggg
gcgggcccggctcccgagcccgccgccgctccggtcgcctcctcgccgtccgagggcgtc
ggcgctcccggcgtcaccagcggcggccgccgccgggcacggcggtcctccaccgacgcg
ttcctggacggccccggcggtacggcggagagcatcggcgacgacgcgaccggcgccgtg
cccgcctcccccgacgaccgtccggacgccgagccgaccggacggcggcgggcccgccga
gggccggccgcctccgaggagcaggcccccgaactgatcccggcccagcagggcgagggc
tcagggcgtcggcgcggccgtcccagcccggccgaggcggctcccgcccccggcacggcc
gcggaagggcccgcggccgccgcgccggagcagcgggaagctcagccgcgtcggagcgcg
ctggccctggcccccgctccgtccgcgtcctccggtccgtccgcgcaccccggctccgcc
gggccgtccgcctccgccgggtcgtccgcctccgccgaaccctccccgcccgccgggccg
tccgggggtgctgccgtcaccggcgccgggaacgcccggagcaccggccgcccggagctc
ggcccgcccgttccgccccagggggccccggccgatccccagcaggccgtgccgtccctg
ggagtcccgaccggccctcagcagcccgtgccgccccggggagtcaccgccggcccccag
cagcccgttcccccgcaggggctcccggtggacccggtcgacccgcagcagcccgtgccg
cccaccgggcgccgggcgcgtcgggagggcgagaacctggccctccccgccctcgcgtcc
ggcagcggcggcgcccccgaggaccggccgggtcaggaaccgtccgcgcccggccctcag
cagcccgggggcaggcgggcccggcgcgccctggccgccgcccaggagcgcgcggccgcc
gacgccggtccgcggaccgccttcgccctgccgccggccgacgccgaccgctccccgggc
gcgcccgacgccccggcgggccccgaccacgggacgagcgcgcaccacgcgcgcaccgca
ccggaggccggctacaccccgccccaggcgcaccccatcgccccgccgaacctcgccccg
cagccgaacggcgccccggcccagggcactcccgcccacgggaccgcccgccacggcgcg
cccgccgcgcctcacaccgtcggcacaccgcagcagcccgggtcgccgacccccgccgcc
gggacgcccggcaccggcgaaccggcgaccccgggcgcggctccggaccacgccgcgtgg
ggcgacgacgcccagggcacccgtaccggcggcgagcacagcccccgtaccggcgtcggc
ccgaccgcgcacgccaccgggaccgcgtccgtcgccgaaccggcggggcacccggcagac
ggtgacgcaggcgccccgggcgcgcgccggcagccgctgccggccgaggagccgatgccg
gagggcgtgcaccccgactcgacgcaggggcgggcgttcagcgtgcggacgctcggccag
ggcgtgccgttcgcccagcacctcgcacaccagcagaaccagccgtaccagggcgtcggc
ggggccggccgacgacgcaagctcgccgccccgccggaggacgaccgcgccccggcccgg
cccggcggcggccagcaggcaccggacctccggcccggcatcggccgaccggccccgaac
cagggggccggcgctcagcagcccggcgcgcggcaggaacagccgggcggcgccaccgcg
cccgcttccgcgcgcggcaccgggcagaacccggaccagcccggtcaggacaaggcgcag
ggcccgttccccgcgcaggagccgaccgccccggctcgcccgggccagcccggtcagaac
gccgccaccggcaccggcacggcctacggcgaggggcaactcatcgcggcgcccttcgcg
gaggggcgcgcgtacgcgataggggcgcccgacgagggggccgaggggccggagccgctg
gacggccccggtggcgcggtcgaggtcgccaaccggccgcacccgcagccgatggacgac
gagctgccgcccgagccgctggacaacccgcgtcggctgctggtctggcccgcccccgac
gtaccgacgcagcaggcgctcagcgaccgcggctaccgtccggtgatcgtgaactcccgc
gaggaggtcgacgcccagatcgccgcgttccccgccgcgctcttcgtcgacccgctgacc
gggcccatcacccgtaccgcgttgcagtcgctgcgccaggcggcggtggcggccgaggtt
ccggtgctggtcaccgccggtctggggcaggcgacccgggaagcggcgtacggggccgac
ccggccgtcctcctcaaggcgctggccccgcgcgacagcgaacagcaccctccgcgcgtc
ctcctgatcgaggagcacgaggagatcgcggcggccctgacgcagacgctggagcggcgc
gggatgcaggtggcgcgcgcggcggcggacagcgaggccgtcgagctggcgggccggatg
cggccgaacctcgtggtgatggacctgatgcaggtacgtcgtcggcgcgccgggatcatc
gactggctgcgggccaacgggcagttgaaccgcaccccgctggtcgtctacacctcggcc
gggatggacccggcggagctgccgcgactcgaatcgggggagaccgtcctcttcctcgcc
gagcggtccaccagcgacgaggtccagtcgcggatcgtcgatctgctcgcgaagatcggc
accaactga
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