Shewanella woodyi: Swoo_1660
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Entry
Swoo_1660 CDS
T00676
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
swd
Shewanella woodyi
Pathway
swd00520
Amino sugar and nucleotide sugar metabolism
swd00541
O-Antigen nucleotide sugar biosynthesis
swd01100
Metabolic pathways
swd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Swoo_1660
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Swoo_1660
Enzymes [BR:
swd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
Swoo_1660
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Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
RmlD_sub_bind
NAD_binding_4
NmrA
KR
adh_short
Sacchrp_dh_NADP
Shikimate_DH
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ACA85946
UniProt:
B1KME8
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Position
2057734..2058786
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AA seq
350 aa
AA seq
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MSGKDIFRGKTLLITGGTGSFGNAVLRRFLNTEIREIRIFSRDEKKQDDMRKHFQSDKLK
FYIGDVRDLQSILSAMRGVDYVYHAAALKQVPSCEFYPLEAVKTNVLGTENVLEAAIANN
VERVVCLSTDKAVYPINAMGISKAMMEKVIVAKSRNLEDSNTTICCTRYGNVMASRGSVI
PLFIRQIVNNEPITITDPTMTRFMMTLDDAVDLVLHAFKNGQNGDIFVQKAPAATIEVLV
TALLEMLKKPEHVVNVIGTRHGEKLFEALCSREEMFVAQEQGEYFRVPADNRDLNYSKFF
EEGDSDLSKVEDYNSHNTERLDVEGMKQLLRKLDFMCEIESGNIIVPEGV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaaagatatttttagagggaaaacactattgataacaggggggacagggtcg
ttcggaaatgctgttttacgccgttttttaaatactgagattagagagatccgtattttt
tcgcgtgatgagaaaaaacaagatgacatgcgaaagcattttcagtcagataaattaaag
ttctatattggtgatgttcgtgacctgcaaagtattttaagtgctatgcggggggtggat
tatgtctatcacgctgcggcattgaagcaggtaccgtcgtgtgagttctatccgttagaa
gccgttaaaactaacgtgttgggaacagaaaacgtactcgaagcagcaatcgctaataat
gttgagcgtgtagtgtgtctgagtacagataaagctgtttacccaattaatgctatgggt
atttcaaaagcgatgatggaaaaagttattgttgctaaaagccgtaatctagaagatagc
aataccacaatttgttgtactcgctatggtaacgtaatggcatcacgtgggtcagttatt
ccattgtttatccgccagatagttaataatgagccaatcacgattacagaccctacaatg
actcgttttatgatgaccttagacgatgccgttgacttggtattacatgctttcaaaaat
ggccaaaatggagatatttttgtgcaaaaagcgccggcagcaacgattgaggtattagta
actgcgttactcgaaatgcttaaaaaaccagagcatgttgtaaacgtgattggtacccgc
cacggtgaaaaattgtttgaagctctatgtagtcgtgaagaaatgtttgttgcacaagag
caaggtgaatattttagagtgcctgcagataatagagacttaaactactcaaagtttttt
gaagaaggcgattcagacctctctaaggtagaagattacaactcgcacaatactgaacgt
ttagacgttgaaggtatgaagcaactactacgtaagcttgattttatgtgtgaaattgag
tctggaaacatcattgttcctgaaggtgtttaa
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