Shewanella woodyi: Swoo_3226
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Entry
Swoo_3226 CDS
T00676
Name
(GenBank) Carbamoyl-phosphate synthase L chain ATP-binding
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
swd
Shewanella woodyi
Pathway
swd00280
Valine, leucine and isoleucine degradation
swd01100
Metabolic pathways
Module
swd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Swoo_3226
Enzymes [BR:
swd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Swoo_3226
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
MCC_alpha_BT
HlyD_3
RimK
GARS_A
ATP-grasp_3
HlyD_D23
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ACA87496
UniProt:
B1KNN8
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All DBs
Position
3954464..3956593
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AA seq
709 aa
AA seq
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MVAQTSKNNNTGKTLLIKKLLIANRGEIACRIIKTAKAMGIRTVALYSDADIDARHVAMA
DESFYLGGSAPADSYLKGDFIVEIAKKSGAQAIHPGYGFLSENADFARLCEQSDIAFVGP
SAAAIDSMGSKSAAKEIMGAAKVPLVPGYHGDEQEDALLVSEAKKMGFPLLIKAAFGGGG
KGMRIVENETEVLDAIHSARREAISSFGNDKLLMERYLRQPRHVEVQVFADNHGNCIYLS
DRDCSIQRRHQKVVEEAPAPGLSDELRVKMGEAAVAAAKAIDYQGAGTVEFLLDTDNSFY
FMEMNTRLQVEHPVTELVTGQDLVKWQLMVASGHPLPLAQDEVRIHGHSFEVRIYAEDPQ
NEFLPASGKLNFLREPEQSRFVRIDSGIRENDVISNFYDPMISKLIVWDESRPRALQRLV
HSLESYQISGLKHNIEFLANIAEHQAFRDANFSTDFIDRYGDGLIGRGLSGNAIKDEQTA
LALAALYQVCARRVAAKACAINSNDPYSPWGTVSGFRLNSASQHQVSLLDDNHELQHLEL
IETSVGGKSIFQMQQGDNLYVLNGELHGELLHAEISLSQADKNRDPLTDKNQAHKFKVPV
SQVDDDFTLFINSSSYHFRAIQTELTEEQECLADKLKAPMNGTVVTHLVNAGDTVTAGQG
LMVMEAMKMEYTIESPFDGIVSAFFFDIGELVSDGAVLVDVEPAKKEEG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggttgcccaaacgtcaaaaaataataacacaggcaaaaccttgctgattaagaagctg
ttaatagccaaccgaggcgaaatagcctgtcgcatcataaaaaccgccaaagccatgggg
atccgtaccgtcgccctctactctgacgccgatattgatgcccgtcatgtggctatggcc
gatgagtctttctaccttggtggcagtgcaccggcagactcctacctcaaaggcgatttt
atcgtcgaaatagccaaaaaatctggcgcacaagctatccatcctggctacggtttccta
tcagagaatgccgattttgcgcgtttatgtgagcaatcagatatcgcttttgttggacca
agcgcagctgctatcgactctatgggcagcaagagtgcggctaaagagatcatgggcgcc
gccaaggtcccactggttcccggttatcacggtgatgagcaagaggatgcgttattagtt
agcgaagcaaagaaaatgggcttcccactacttatcaaagcggcctttggcggtggcggt
aaaggaatgcgtatcgttgagaacgaaactgaagttctggacgccatccactcagctcgt
cgtgaagctatctcctcttttggcaacgacaagctactgatggagcgttatcttcgccaa
cctcgccacgtcgaagtgcaggtctttgccgataatcatggcaactgtatctatctttca
gacagagactgctctatccagcgacgccaccaaaaagttgtcgaggaagcaccggcgcca
ggattaagtgatgagttaagagtcaagatgggagaagcggccgttgcagcggcaaaagcc
atcgactatcaaggtgcaggcacagttgaatttttgcttgatactgacaacagcttctac
tttatggagatgaacacccgtctgcaggttgagcacccagtaaccgagctggtaacaggc
caagatctcgtcaagtggcagctgatggttgccagtggtcatccactgccactagcccaa
gatgaagtcagaatacatggccactcttttgaggtgcgtatctacgcagaagacccgcaa
aatgagtttcttcctgccagcggtaaactcaacttcctgcgcgaaccagagcaaagcaga
tttgtacgtatcgactctgggatccgtgaaaatgatgtgatcagtaacttttacgatccc
atgatctctaaattaattgtttgggatgaatcccgcccaagagcgctacaacgtctggtg
cactcattagagtcatatcagataagtggcctaaaacataatatcgagtttcttgctaat
atcgccgagcatcaagcatttcgtgatgctaacttcagcacagactttatcgaccgttac
ggtgatggccttatcggacgtggcctaagtggcaatgccattaaggatgagcaaacagca
ttggcactagccgctctgtatcaagtctgtgcccgaagagtggcagcaaaagcctgtgcc
attaacagcaatgacccatactcaccttgggggacagtcagcggctttagactcaatagc
gccagtcagcatcaggtctctctgctcgatgataatcatgagctgcaacatcttgagctt
attgaaacctctgttggcggcaaatctatcttccagatgcagcaaggggacaacctctat
gtgctcaatggtgagctgcacggtgaactgctccatgcagagatctcactgagccaagca
gataaaaaccgtgatccactgacagataaaaaccaagcacacaaattcaaggtgcctgtg
agtcaggtcgatgatgactttaccctttttattaactctagtagttaccatttccgtgcg
atccaaactgagctaactgaggagcaggagtgccttgccgataagcttaaagcgccgatg
aatggcacagtggtcactcatctggtgaatgctggcgacacagtgaccgcaggacaaggc
ttaatggtgatggaagccatgaaaatggaatatacaatagaatctccctttgatggcatt
gtcagtgcattcttcttcgacataggtgagctagtcagtgatggcgcagttttagttgat
gttgaacctgctaaaaaagaagagggataa
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