Shewanella woodyi: Swoo_3735
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Entry
Swoo_3735 CDS
T00676
Name
(GenBank) TonB-dependent receptor plug
KO
K16092
vitamin B12 transporter
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_3735
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_3735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
MIER1_3_C
Motif
Other DBs
NCBI-ProteinID:
ACA87994
UniProt:
B1KDZ2
LinkDB
All DBs
Position
complement(4548144..4550030)
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AA seq
628 aa
AA seq
DB search
MGTLSIKESNKGSIKLSQVALLVSSIISLSSYSAMAEDVTANAVDVDEKITVTGSRFDRT
ADQQLTVINTIEREEIARLNPKSVADVLETLPGVSISRNGGAGQATSVSVRGSNSNHVLV
LIDGVKVGSATLGTVSFNTLSPENIERIEVLKGPRASVWGSDAIGGVIQIFTRQLKDGEW
FAGAEYGSNDYIRGSFGTGMSHGKGSTTLAVNHEQSDGYDVYNGAPVENDDDGYNRTSLS
LKGSQQINQNWQALWNGQYDKGNTQYDDIYAFGSADESDFDNYLWNLAAQYSNEQFTSKL
ALSQSSDANENFRGDDITVPVSVFETKRDQINWSNQYLAANDLTFIGGIDWSNEAVKGDY
AQDERDIFGAYILAQKQWSQLLAEVAVRYDDVENIDSEVSYNASLAYQLTEEWRLAASTG
TAFKAPTFNDLYWPGSGNPDLISETAKSYDLTLHYQANDIHAYISVFKNTIDNLIAWVPT
GEKDDYGFDIWKPANINQAEISGVELFTKFGLFGFDNQLAYTYLEPENKKTGEMLIGRSV
EELNYSLSYQWQSFDFLANYHYQGKRYAGYDLYLEAYHKLDLSIGYHLDDAWSLRLKANN
LFDEEIISAQNYFSPGREFFFSVSYQAF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggtacactatctattaaagagtctaataaaggctctatcaaactatcacaagttgca
ctgttagtgagcagtatcatcagcttatcttcatattcggctatggctgaggacgttact
gccaatgcggtcgacgttgatgaaaagatcactgtaacgggttcacgttttgacagaacc
gccgatcagcagcttactgttatcaatactattgaacgtgaagagatagcacgtctcaat
cctaagtctgttgccgatgtactagagacattaccaggagttagcatttcacgtaacggt
ggtgcgggccaggcgacatctgttagtgttcgcggcagcaattcaaatcatgtattagtg
ctaattgatggcgtaaaagttggttcggcaacactcggcactgttagctttaatacgctt
tcacctgaaaatattgagcgtatcgaagtgttaaaaggacctcgtgcatcagtttggggc
agcgacgcgattggcggcgtgatccaaatttttactcgtcagttaaaagatggtgagtgg
tttgctggtgcagaatacggcagcaacgattacattcgcggctcgtttggcacaggtatg
agtcatggtaagggcagcacaacgcttgctgttaaccatgaacagtctgatggatacgat
gtctacaatggtgcaccggttgaaaatgacgatgacggttataaccgcacctctttatcg
ttaaaaggttctcagcaaattaatcaaaactggcaagcactttggaatggccagtatgat
aaaggcaatactcaatacgatgatatctatgcatttggctctgccgatgagtcagacttt
gataactacctttggaaccttgctgcgcagtatagcaatgagcaatttaccagtaagctg
gcattaagccagtctagtgatgcgaacgaaaacttccgtggcgacgatatcacggtgccg
gtttcagtatttgaaaccaagcgcgatcaaattaactggagtaaccaatatctagcggct
aatgatttaaccttcatcggtggtattgattggtcaaatgaagcggttaaaggtgattat
gctcaagatgaacgcgatatttttggagcctatatacttgcgcagaagcagtggagccaa
ttacttgccgaagttgcagtgcgttatgatgatgtagaaaacattgacagtgaagtgtct
tacaacgccagcctcgcttaccagcttactgaagagtggcgtttggcggcatcaactggt
actgcttttaaagcgccgacctttaatgacttatactggccaggttctggtaacccagat
ctgatttcagagacagctaaaagttacgatctaactttgcactatcaagctaatgatatt
cacgcttacatcagtgtgttcaaaaacacaattgataacctaattgcctgggttcctact
ggtgaaaaagatgactatggttttgatatctggaagcctgccaatatcaatcaagctgaa
atttcaggtgttgaattatttactaaatttggactatttggattcgacaatcaattagcc
tatacctatttagagccagagaataagaaaactggtgaaatgctaattggccgtagtgtt
gaagagctgaactatagtttaagctatcaatggcaaagtttcgattttcttgctaactat
cactatcaaggcaagcgttacgctggttatgatttatatcttgaagcatatcataagcta
gatttaagcattggctatcatctagatgatgcgtggagcttacgcttgaaagcgaataac
ctgttcgatgaagagattatttcagcgcaaaactactttagccctggaagagagtttttc
tttagcgtgagttaccaagcgttctag
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