Shewanella woodyi: Swoo_3836
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Entry
Swoo_3836 CDS
T00676
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_3836
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_3836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
STN
Porin_2
Motif
Other DBs
NCBI-ProteinID:
ACA88095
UniProt:
B1KET0
LinkDB
All DBs
Position
4678982..4682275
Genome browser
AA seq
1097 aa
AA seq
DB search
MFHKKIKIINFLWRKNFYQSSSFGAWQKTMHLRDRKLISQLFFLCLVSSFTPGLIAKEAV
DSVAFNIPQQRAYLSLIYLAEQADITLLFSFEKVEGIDVNAVHGEYNTMDALKLMLENTG
LVAQMNDSGQISILYNKNHKRQDDMTTYNKNQVASAVLAAMGTLASPQLLAAEADTSADT
KMEVIEVSGIRGSLSRSMDVKRSAEGVVDSISSEDIGKFPDTNLAESLQRITGVSIDRSG
GEGQSITVRGFGPQFNTVLVNGRQIASESDTRGFSFDTIAAELVSSLDVHKTSSATMQSG
GIGSTVNINTAKPFAINGFKAAGSIKGIYDENSEETTPQISGLISNTFLDDSFGVLLGVS
HQERKTRLNQAQIDGWLENVGIPDPKTASGEAYTGNIFSARNYDHKVTFEDRTRTNANLV
LQYAPTDNLVLTADALYSDFDVETNATSYGHWFTAPNVTGVDGGSPIVDANGTVVDMYQE
VGLATDFHAKKFDRITDSKSFGLSADWDVNDNLNMSFDYSHSEASREANNGRGNQLSLIG
YANRVRFQVNDDILPNASMFESANPNIYSGQQELDGTAYDPSVTPAGVQDYLSTDNSRAH
VMLRRGWEVQDELDQFRWDNTWLADGDTGFSAARFGMMYSTETKSLNRWDNEGEGLHCAY
CGYPDSPTISPDAQYIFDAGSDFLSGVSGSGQMPTSWLAHDGEANFAFLEQYYASTNSDT
ISFDAVLRDKSYSVQEDIFAAYFEVDFVGEIAGMLISSTAGVRYETTDTDVKGRDKPIAQ
LNILDKTEMLPAYGSVEAISQANSYDAILPSFSVKLEITDDLVARLAASKTMTRPTLNSM
SPITVINTTRPGGDLTSSQGNPKLKPFSSENLDLSLEWYYDEVSYVSAGYFRKNVENFIV
NTQEDLTFTLSDGSLLTDPSTGDDTDNPDSNDGVAHFTNTRPNNGESAIVDGWELAVQHS
FGESGFGVMANATLVSSNAELDAADITQVFALTGLSDSVNLVAFYESGPIQTRLAWNWRD
SFVQSLTQTNGDGPTIVESYAQLDLSGSYDLTENLAVFFEGVNLTEEYVHKRGRFENQLL
SVEDSGRRFALGIRGSF
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacaaaaaaataaaaataataaattttttatggaggaaaaatttctatcaatcg
tcttcctttggtgcgtggcaaaaaaccatgcatttgcgggatcgaaaactgatcagtcag
ctttttttcttatgtttagtctcaagttttacacctgggctaatcgctaaagaggccgtc
gacagtgttgctttcaatatccctcaacaaagggcctatttgtcactcatctatctggct
gagcaggcggatattaccctgctcttttcattcgaaaaggtggaggggatagacgtaaat
gcggtacatggcgaatacaacaccatggatgcgctgaagttaatgctcgaaaataccggg
cttgttgcacagatgaacgacagtgggcagatctcaatcttatataataaaaatcataag
agacaagacgatatgaccacctacaacaagaatcaagtagcaagtgcagtgttagctgca
atgggaactttagcctcaccgcagctattggccgcagaggcagataccagtgccgatacc
aaaatggaagtgattgaggtcagtgggatcagaggctctctaagccgctccatggatgta
aaacgcagtgctgaaggggttgttgactcaatctcctctgaagatataggtaagtttccc
gacaccaacctcgccgagtctctgcaacgaattactggtgtttccatcgaccgctcgggg
ggagaggggcagtcgatcaccgtcagaggatttggccctcaattcaataccgtactggtc
aatggccgccagatagccagtgaaagtgatacccgcggctttagtttcgacaccattgcc
gcagagctggtcagcagcttagatgtccataaaacctcatcggccaccatgcaatcgggt
gggatcggttcgaccgtgaacatcaatacagcaaagcctttcgccatcaatggctttaaa
gccgctggtagtatcaaggggatctacgatgagaatagcgaagagaccacgcctcagatc
tcaggtttaatcagtaacacctttttagatgacagctttggtgtgctgctcggagtctca
catcaggagcgaaaaacacgcctaaatcaggctcaaattgatggttggttagagaatgtc
gggatcccagatcctaaaacagcctcaggagaagcctacacaggcaatatcttctccgct
cgtaactatgatcacaaggtcacctttgaagatcgcaccagaaccaatgccaacttagtg
ctgcaatacgcaccaaccgataacttagtgctcaccgccgatgcactctactcagatttt
gatgtggaaaccaatgccacctcatacggtcactggttcacagcgcctaacgtcacaggt
gtcgatggcggtagtcccattgtcgacgcgaatggtactgtcgtcgacatgtatcaagag
gttggtttagcaacggattttcacgccaagaaatttgatcgtattacagattcaaaatcc
ttcggcctgagtgccgattgggacgtgaatgataacctcaatatgagtttcgactacagt
cactcagaggccagtcgtgaagccaataatggtcgtggtaatcagttatcacttatcggt
tacgccaatcgcgtccgctttcaagtcaatgacgatatcctccccaacgcctcaatgttt
gaatcagccaacccaaacatctatagcggtcaacaggagctcgacggcacagcttacgat
ccctcagtcacaccagcaggtgtacaagactacctgagtacagataatagccgagcccat
gtgatgctacgtcgaggctgggaagttcaagatgagctagaccaatttagatgggacaac
acttggcttgccgacggcgacacaggctttagcgcggctcgatttggtatgatgtactca
accgagactaaaagcctcaaccgatgggataacgagggagaggggcttcactgtgcatac
tgtggctatcccgacagtcccacaatcagtcctgatgcgcagtatatcttcgatgctggc
agtgacttcctcagtggtgttagtggtagcggccagatgcctacctcttggctcgcccat
gacggtgaagccaactttgcctttcttgagcagtattacgccagtacaaacagtgacact
atcagtttcgatgcagtgctcagagataagtcatacagtgtgcaagaggatatctttgcc
gcctacttcgaggtcgattttgtcggcgagatcgcaggcatgctcatttcaagcaccgca
ggtgtgagatatgaaaccacagacacagatgttaaaggtcgtgataagccaatagctcag
ctcaacatcttagataaaacagagatgttacccgcctatggcagtgttgaagcgatcagc
caagccaatagctatgatgctatcttgccaagctttagcgttaaattagagataaccgac
gacttagtggcacgactggcagcatcgaaaaccatgacccgtccaacactcaacagcatg
tcgccaatcacggtgatcaacaccacccgtcccggtggcgatctcacctccagccaaggt
aaccctaagctcaagccatttagctctgagaacttagatctctcccttgagtggtattac
gatgaggtcagctacgtctcagcgggttactttagaaagaacgttgaaaacttcatcgtt
aatacccaagaggatctcactttcaccttaagtgatggcagcttactgaccgatccctcg
accggtgatgacacagataaccccgacagcaatgacggcgtcgcacacttcaccaatact
cgtcccaataacggagagtcggccatagtcgacggttgggaacttgccgtgcagcacagc
tttggcgagtcaggctttggcgtaatggctaatgcaacacttgtcagcagcaacgccgaa
ctcgacgccgctgatatcactcaagtgtttgcgcttacaggcttaagtgactcagtgaac
ctggttgccttctatgaaagtggtcctatccagacacgtcttgcctggaactggcgtgac
tcatttgtgcagtctctgacacaaaccaatggcgatggtcccacaatcgttgagagttac
gcacaactcgatttaagcggtagctatgatctcaccgagaacctagcagtcttctttgaa
ggggtgaacttaactgaagagtacgtccataaacgcggacgcttcgaaaaccaactactc
tcagttgaagacagtggccgtcgattcgcgttaggtatacgcggctcattctaa
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integrated database retrieval system
