Shewanella woodyi: Swoo_4739
Help
Entry
Swoo_4739 CDS
T00676
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
swd
Shewanella woodyi
Pathway
swd00250
Alanine, aspartate and glutamate metabolism
swd00410
beta-Alanine metabolism
swd00430
Taurine and hypotaurine metabolism
swd00650
Butanoate metabolism
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01120
Microbial metabolism in diverse environments
swd02024
Quorum sensing
Module
swd_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Swoo_4739
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Swoo_4739
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Swoo_4739
00430 Taurine and hypotaurine metabolism
Swoo_4739
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Swoo_4739
Enzymes [BR:
swd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Swoo_4739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ACA88989
UniProt:
B1KN32
LinkDB
All DBs
Position
complement(5719039..5720433)
Genome browser
AA seq
464 aa
AA seq
DB search
MPLHSKDTVRDDLLDDIYSSADLALSMPKYKMPEQEHDSRHVYQVIHDELMMDGNSRQNL
ATFCQTWVEDEVHKLMDECIDKNMIDKDEYPQTAELEARCVHMLADLWHSPDAENTLGCS
TTGSSEAAMLGGMALKWAWREKMRKLGKPTDKPNLICGPVQVCWHKFARYWDIELREIPM
EGDRLIMTPEEVIKRCDENTIGVVPTLGVTFTCQYEPVKAVHEALDQLQKDTGLDIPMHI
DAASGGFLAPFCDPDLEWDFRLPRVKSINASGHKFGLSPLGVGWVIWRDASALDKDLIFN
VNYLGGNMPTFALNFSRPGGQIVAQYYNFLRLGREGYRKIHQACYDTAIYLSGEIEKMGM
FDIIYDGQGGIPAMSWSLKEGVEPGFNLFDLSDRIRSRGWQIAAYAMPPKREDLVIMRIL
VRHGFSRDQADLLVADLQHCVDFFAKHPISHSSDEAESAGFNHG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcattccaaggatacggttagagatgaccttctcgatgacatctactcgtca
gctgacctggccctatctatgccaaagtacaaaatgcctgaacaggaacatgactctcgc
catgtttatcaggttattcacgatgaactcatgatggacggtaactcgcgacagaatctg
gcgacattttgtcagacttgggtcgaagatgaagtgcacaagctgatggatgaatgtatc
gataagaatatgatcgataaagatgaatatcctcagacggctgagcttgaggctcgctgt
gtgcatatgttggcagatctgtggcactcaccggatgcggagaacaccttaggttgctcc
acaacgggttcgagtgaagccgccatgttaggtggaatggcgctgaaatgggcttggcgt
gaaaagatgagaaagctaggtaagccaacggataagccaaatttaatctgtggtccagtg
caggtgtgttggcataagtttgctcgctactgggatattgagctacgtgagatcccgatg
gagggtgatcgcctcatcatgacgcctgaagaggtgattaaacgctgtgatgaaaacacc
ataggtgtagtgcccacacttggtgttacctttacctgccaatatgagccagttaaggcg
gtacatgaagccttagatcagctacaaaaagacactggcttagatatccccatgcatatt
gatgctgccagtggtggtttcttagcaccattttgcgatccagaccttgagtgggacttc
cgcttgcctcgagttaagtctattaatgcttccggacataagtttggtttgagcccgtta
ggggtgggctgggtgatctggcgtgatgcgtcagcactggataaagatcttatcttcaat
gtgaactatctaggtggcaatatgccgacctttgcattgaacttctcccgtcctggcggt
cagatcgtggcgcaatattacaactttttgcgtttaggccgagagggatatcgcaagata
catcaagcttgctatgacactgcgatctacctctcaggagagatcgagaagatggggatg
tttgacattatctatgatggccaaggtggtattcctgccatgagttggtcgttgaaagag
ggggttgaaccaggctttaacctatttgacctttccgatcggatccgctcccgtggttgg
caaattgccgcctatgcgatgccgccaaagcgggaagatttagtgattatgcgtatctta
gttcgtcatggctttagtcgggatcaagccgatctcttggtggccgatctgcagcattgt
gtcgacttttttgcaaaacatcctatttcacatagcagtgatgaagcggaatctgcaggt
ttcaatcacggttag
DBGET
integrated database retrieval system