Rhizorhabdus wittichii RW1: Swit_2105
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Entry
Swit_2105 CDS
T00538
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K18687
HIP---CoA ligase [EC:
6.2.1.41
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00984
Steroid degradation
swi01100
Metabolic pathways
swi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
Swit_2105
Enzymes [BR:
swi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.41 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate---CoA ligase
Swit_2105
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Motif
Pfam:
AMP-binding
AMP-binding_C
TetR_C_24
DUF6142
Motif
Other DBs
NCBI-ProteinID:
ABQ68464
UniProt:
A0A9J9LDS8
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Position
complement(2366624..2368261)
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AA seq
545 aa
AA seq
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MASTDTLTAHRSIAHLLRDRAIDHADRIAVREGDRETSVRDLHDAARRMARALIAAGIAP
GDFVVCWAPNVTRWVIAAHAAWMAGAVLMPLSTRLKAREVGPLLEATGAKLLVTVGECAG
TRLIDIVKAAYGAGTDRPFDRLPAVRRIVRLDEDSASAPGEVGFADFLASGEGVSDADLD
AVIAGIDEEMLAEVMFTSGSTGAPKGVQLSHGQLMRAYRDWADVAALRAGDVYLVIPPFS
HGFGLNAGILASAERGMTMVLMDIFDPARALDLILRHGITVASGPPNLYLALLDQRARTG
AEVTTMRVCFIGAASVPMELLRRVRAELGVRRAINAYGLIEGCVVSMTRADDPEDVVSTT
TGRPMDGVEVRIVDDGNRPVPQGQTGEIVMRGYNVMQGYWREPELTAAAIDADGWLHSGD
IGLLESHGCIRIVDRKKDMFTCGGFNVYPAEVENLLLSSGLMSAVSVVGVADRRLGEVGV
AFVIPHPGSDVTAEALTAWARENMANYKVPRTFVLGTELPLNANGKVAKDVLRTSARQYS
DAGQA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaccgacaccctgaccgcccatcgcagcatcgcgcacctgctgcgcgaccgc
gccatcgaccatgccgatcggatcgcggtgcgcgagggcgaccgcgagaccagcgtccgc
gacctccacgacgcggcgcgccgcatggcccgcgcgctgatcgcggccgggatcgcgccc
ggcgacttcgtcgtctgctgggcgcccaacgtcacccgctgggtgatcgcggcgcacgcc
gcctggatggcgggcgcggtgctgatgccgctgtcgacccggctcaaggcgcgcgaggtc
ggcccgctgctggaggcgaccggcgccaagctgctcgtcaccgtcggcgaatgcgcgggc
acccggctgatcgacatcgtcaaggcggcttacggcgcgggaaccgaccggccgttcgac
cggctgccggcggtgcgccgcatcgtccgcctcgacgaggactccgcttccgcgccgggc
gaggtcggcttcgccgatttcctggcgagcggcgagggcgtgtccgacgccgatctcgat
gcggtgatcgccgggatcgacgaggagatgctggccgaggtgatgttcacctcgggatcg
accggcgcgcccaagggggtacagctcagccatggccagctgatgcgcgcctatcgcgac
tgggccgacgtcgcggcgctgcgcgcgggcgacgtctatctggtgatcccgcccttctcg
cacggcttcggcctcaacgcgggcatcctcgccagcgccgagcgcggcatgacgatggtg
ctgatggacatcttcgatccggcgcgcgcgctggacctgatcctgcgccacggcatcacc
gtcgcctcggggccgcccaacctctacctcgccctgctcgaccagcgcgcccgcaccggc
gccgaggtgacgacgatgcgcgtctgcttcatcggcgcggcgagcgtgccgatggagctg
ctgcgccgggtccgcgccgaactgggcgtacggcgcgcgatcaacgcctatgggctgatc
gagggctgcgtcgtctcgatgacccgcgccgacgatcccgaggacgtcgtctcgacgacc
acggggcggccgatggacggggtcgaggtccgcatcgtcgacgacgggaaccggccggtg
ccgcagggccagaccggcgagatcgtgatgcgcggctacaacgtcatgcagggctattgg
cgcgagcccgagctgaccgccgccgcgatcgacgccgacggctggctgcacagcggcgac
atcggcctgctcgaaagccatggctgcatccgcatcgtcgaccgcaagaaggacatgttc
acctgcggcggcttcaacgtctacccggccgaggtcgagaacctgttgctgtcgtcgggg
ctgatgtcggcggtgtcggtggtgggcgtcgccgaccggcggctgggcgaggtcggcgtc
gccttcgtcatcccgcatccgggcagcgacgtcaccgccgaggcgctgaccgcctgggcc
cgcgagaacatggccaactacaaggttccccggaccttcgtgctcggcacggagcttccg
ctcaacgcaaatggcaaggtggcgaaagatgtactgcgaacgagcgcccgccaatattca
gacgctggacaagcctga
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