Rhizorhabdus wittichii RW1: Swit_3911
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Entry
Swit_3911 CDS
T00538
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Swit_3911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_3911
Enzymes [BR:
swi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Swit_3911
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Swit_3911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABQ70256
UniProt:
A0A9J9HEE0
LinkDB
All DBs
Position
complement(4295278..4296093)
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AA seq
271 aa
AA seq
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MDDGRLRARYPRRMKIATFNINGIKARLPRLVEWLEQKAPDVACLQEIKTSDETFPIAEI
EAAGYGAIWHGQKGFNGVAILAKGAQPVERRKGLPDDPDPSHSRYIEAEVNGVVVASIYL
PNGNPAPGPKFDYKLAWFDRLIDHAADLWAGEMPVVLAGDYNVIPTPSTDDVFSERAMAS
DALTQPESRAAFRRLCNAGWTDAVRTIHPHGPVYTFWDYQAGAWQRDAGFRIDHLMLSPA
AADRLTGAGVDKDTRALEKASDHAPTWITLR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggacgcctccgggcacgctatccccgccgcatgaagatcgcgaccttcaac
atcaacgggatcaaggcccgtctcccccgcctcgtcgaatggctcgagcagaaggcgccc
gacgtcgcctgcctgcaggagatcaagacctccgacgagaccttcccgatcgccgagatc
gaggccgccggctatggggcgatctggcacgggcagaagggcttcaacggcgtcgcgatc
ctcgccaagggggcgcaaccggtcgagcggcgcaagggcctgcccgacgatcccgatccc
agccacagccgctatatcgaggcggaggtgaacggcgtggtcgtcgcctcgatctacctg
cccaatggcaatccggcgccgggcccgaagttcgattacaagctcgcctggttcgaccgg
ctgatcgaccatgccgccgatctgtgggcgggcgagatgccggtggtgctggccggcgac
tataacgtcatcccgaccccgtcgaccgacgacgtcttctccgaacgggcgatggcgagc
gacgcgctgacccagcccgagagccgcgccgccttccgccggctgtgcaacgcgggctgg
accgacgcggtacggacgatccatccgcacgggccggtctacaccttctgggactatcag
gccggcgcctggcagcgcgacgccggcttccgcatcgaccatctgatgctgagccccgcc
gccgccgaccggctgaccggcgccggggtcgacaaggacacccgcgcgctggagaaggcc
agcgaccacgcgccgacctggatcacgctgcgctga
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