Rhizorhabdus wittichii RW1: Swit_4043
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Entry
Swit_4043 CDS
T00538
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Swit_4043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_4043
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Swit_4043
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Swit_4043
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Ortholog
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GFIT
Motif
Pfam:
Toprim_4
RecR_C
RecR_HhH
RecR_ZnF
Toprim
Motif
Other DBs
NCBI-ProteinID:
ABQ70387
UniProt:
A5VDM1
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Position
4447888..4448484
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AA seq
198 aa
AA seq
DB search
MSSPEIETLTQALAKLPGLGPRSARRAVLHLLKKREAALGPLLRALEAVNDKLTSCHVCG
NVDTGDPCGICADPRRDARMLCVVEEVADLWALDRSRLFPGRFHVLGGRLSALEGIRPED
LSIDLLIGRIAAGGIDEVVLAMNATLEGQTTAHYIADRLESFPVRLTQLAHGLPVGGELD
YLDEGTLAQALRARRPVS
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcccgagatcgaaacgctgacccaggcgctcgcgaagctgcccggcctcggg
ccgcgctcggcgcgccgggcggtcctgcacctgctcaagaagcgcgaggcggcgctcggc
ccgctgctgcgcgcgctggaggcggtcaacgacaagctgacgagttgccatgtctgcggc
aatgtcgacaccggcgatccgtgcggcatctgcgccgatccccggcgcgacgcgcggatg
ctgtgcgtggtggaggaggtcgccgatctctgggcgctcgatcggtcgcgcctgttcccc
ggccgcttccacgtcctcggcgggcggctctccgcgctggagggaatccggcccgaggac
ctgtcgatcgacctgctgatcggccggatcgcggccggcgggatcgacgaggtggtgctg
gcgatgaacgccacgctcgaagggcagaccaccgcccattatatcgccgaccggctggag
agcttcccggtccggctgacccagctcgcccacggcctgccggtgggcggcgagctcgac
tatctcgacgagggcaccctggcgcaggcgctgcgcgcgcgccgtccggtgagttga
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