Rhizorhabdus wittichii RW1: Swit_5075
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Entry
Swit_5075 CDS
T00538
Name
(GenBank) transposase Tn3 family protein
Organism
swi
Rhizorhabdus wittichii RW1
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_Tn3
DUF4158
Motif
Other DBs
NCBI-ProteinID:
ABQ71687
UniProt:
A0A9J9LFD5
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Position
pSWIT02:189646..192564
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AA seq
972 aa
AA seq
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MDVPLRQYLGWERFPANLTEAEVASFFSLSGDQRRAVCRRRRPLNRLGLALQIGFLRLTG
ASLNSVEMIPPQVLAHIGAELGIAPPRLASIRALYRRRRTLFEHHDAAKQALGVRDLTEH
GERALNGFLRREAGDKFLVDELEQAARAWLHDHHYLQLPGRRLRGSAAAARRQHDGGLLV
SAVAAVGTEQAKAWPLMLSETMTNGKTRLEWLRDSPASRKTKGLADHIAKIDFLKKLGAE
KLDLGLATGMLKAQARSMLYRKPATLKRMRGERKTLEIACFLRLQLLRLTDDGLGMIDYR
IADLWRQARTRAEAAVEVELHQHQALVMDLACLVDDENSSDSTVRDQMRRRLAPFLPAGA
HGPSTKVDRVRRELATAARGASELLGAASSISLDVPSTHPLAQALATLGRLEVSGGRQLP
EGTDNPFGRTWSFLIDQPDREAALGGYRAATLVLLKRSVRNGQASVVHSLEHRAPEDRLI
PKAQWQKERARYARNLAVSAKPEVTIRWIKDELATALKAIDAAVSKGDIRIENDRLVVPK
LKAAPEDEKLKAIRRELFAGVGKIQLPDLLISIDATTHFSWVLLGRAPRSEHELILLYAA
LIALGSDLTAADMARMTLNIEADAVGEMMRRIEANGRLPAANRVVLDHFRTLPVTRLWGG
GLQASADMMSLDATRRLWTARYDPRRRTPAVGTYTHVLDQWVILHDQAVVLNRRQAGAAI
EGALRHESVDLHRVAVDTHGHTHFGMALANLVGFDLAPRLAGMNKRKLYLPRGLNIPATL
RPIVSETVSLSAITQGWDPLLRIAASTKSGWCSATYVLDRFGSAARGDEAFQAGDAFGKL
LLTRFLGAYLGDPAFRGMNDALLSQGESVHTLQRAIYSGPIGARHGRTPEQMAAISSGLT
LLTNVIMTWNATRIGEVRARMPDIFPDHHIKHIAPNAHEHINTKGVITIDVSLHRDRLLG
AGPPAAGIRNVI
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtgccgcttcgacaatatcttggttgggaacgctttccggcaaatttgaccgaa
gctgaagtcgcttccttcttctcactttccggggatcaacggcgagccgtttgccgccgc
cgccgcccgttgaaccggttgggcctggcgctgcagatcggctttcttcgactaacgggg
gcgtcgcttaattccgtggagatgatcccgccgcaagtcctggctcatatcggcgcggag
ctcgggattgcaccaccccgccttgcctcaatccgcgcgctttaccgccgccgccgcacg
ttgttcgagcaccacgacgcagcgaaacaggcgctgggtgtacgcgatctcaccgagcat
ggggaacgtgcgctaaatggctttctgcggcgtgaggccggcgacaaatttctggtcgac
gagttggaacaagccgcgcgcgcatggctccatgatcaccactatctccaattgcccggg
cggcggctgcgggggtcggcggcagcagcccgccgccagcacgatggcggactgttggtg
agcgcagtggccgctgtggggacagaacaagcgaaagcctggccgctcatgctgtcggag
acgatgacgaacggcaagacgcgattggaatggcttcgagacagtcctgcgtcccgtaaa
accaaagggctcgccgaccacatcgcgaagatcgattttctgaagaagcttggagccgag
aagctcgacctcggcttggcgaccggaatgctaaaggcccaggcgcgatcaatgctctac
cgcaagcctgcgacactcaagcggatgcgcggcgagcgcaagaccctcgagatagcctgc
tttttacgcctgcaattgctgcgtctcacagacgatggtctgggaatgatcgattatcgg
atcgccgatctctggcgccaggcccggacccgcgccgaggcggcggttgaggtcgaactg
caccagcatcaggcgttggtcatggacttggcatgccttgtcgatgacgagaacagctcc
gattccaccgtgcgcgaccagatgcgcagaagactggcgccgttcctgccggccggcgcg
cacggtccgtccacgaaggttgaccgggtccggcgggaactggcgacagcagccagaggt
gccagtgagttgctgggcgccgcttcgtcgatcagtctggatgtcccatcgacgcacccg
cttgcgcaggccctcgcgacactgggccggctggaggtttcgggaggacgacaactgccg
gagggcacagacaatccattcggccggacatggtcgttcctcatcgatcaaccggaccgc
gaggccgcccttggcggctatagggcggcgacgctcgtgctgctgaaacgctcagtgcgc
aatggccaggccagcgtcgtccacagcctggaacatcgtgcccctgaggaccgtctgatt
ccaaaagcgcaatggcaaaaggaacgagcacggtacgcgcgaaacctcgcggtgtcagcc
aagccggaggtgaccatccgctggatcaaggatgaactcgcgacggccttgaaagcgatc
gatgctgcggtgtccaagggcgatatccggatcgaaaacgaccgcttggtcgtcccaaaa
ctcaaggcggcgccggaagatgaaaagctcaaggccattcggcgcgagctattcgccggc
gtcggaaagatccagctaccggacctgctgatatccattgatgccactacgcatttttcc
tgggtcctgttgggcagggcgccgcgaagcgagcatgaactcatactcctttacgcggcc
ctgatagccctgggctccgatctgaccgccgccgacatggcgcgcatgacgctcaatatt
gaggccgacgctgtcggtgagatgatgcgccgcatcgaggcgaatggtcgattgccggca
gccaaccgtgtggtacttgatcatttcaggacgctcccggtcacgagattgtggggaggc
ggacttcaggcatcagccgacatgatgagccttgatgcaacccgtcgtctttggacagcc
cgctatgatccgcgccgccgcacgccggcggtcggaacctacacccatgtgctcgaccaa
tgggtgatcctacacgaccaggcggtcgtgctgaaccgtcggcaagcgggggccgctatc
gaaggggctcttcgccacgaatccgtcgacctccaccgtgtcgcggtggatacccatggc
cacacacatttcggcatggcgctggccaatctggtggggtttgatctcgccccgaggctg
gccgggatgaacaaacgcaagctgtatctcccacgtggcctgaatatacctgccaccctt
cgaccgattgtgagcgagaccgtctcactcagtgccatcacccagggctgggacccgctc
ctgcggattgcggcatcgaccaagagtggctggtgttcggcgacctacgttctggaccgc
tttggcagcgccgcacgaggcgatgaagcatttcaggcaggagatgccttcggcaagctc
ttgcttacccgctttctgggcgcttatcttggcgatccggcgttcagagggatgaatgac
gccctgcttagccaaggtgagtcggtccacaccctgcagcgcgcgatctattccggcccg
atcggcgcacggcatggccggacgccagagcagatggccgcgatatcgtcaggcctgaca
ttgcttaccaacgtcatcatgacgtggaacgcgacccggatcggtgaggttcgagcgcga
atgccggacatctttccggatcaccacatcaagcacatcgcccccaacgcgcacgagcat
atcaacaccaagggcgtcatcacgattgacgtctcgctacaccgggaccggctcttgggc
gcgggaccgccagcggccgggattagaaatgtaatatga
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