Syntrophomonas wolfei: Swol_2500
Help
Entry
Swol_2500 CDS
T00396
Name
(GenBank) Leucine-rich repeat (LRR) protein-like protein
Organism
swo
Syntrophomonas wolfei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
NHL
LRR_8
CarboxypepD_reg
CarbopepD_reg_2
SdrD_B
SBBP
SGL
LRR_9
Big_5
LRR_6
SpaA
Big_2
Motif
Other DBs
NCBI-ProteinID:
ABI69789
UniProt:
Q0AU15
LinkDB
All DBs
Position
2842854..2846909
Genome browser
AA seq
1351 aa
AA seq
DB search
MKKGFCHNSKLLISIVLAVSLLMTSVPDAFAATINTASISGVVTGQGGTPLPGILVLLYK
NYERISTANTDTNGQYSFGDLSSGSYRMLFSPTSYNQKNGTTYAYQRSPYSSTSLSSPIT
LSDGQSLSINTQLENAGFISGKVYDPDGKPLTGIMVCEVYEGSTYGRNYTNTSGEYIITQ
LPAENYKVHFDPAEHNAQYGTDYLEQWYNNKPGSNLADEVAVIQGQTINADAYLQISSGT
VSGLKAKACGNQISLSWSAFPGAQSYSIYRTSRFFGINYQKIDATTSSSYTDSNLPLSTD
YWYKVKPVTAIGEGSFSAPVRTKTGDTIITDPGVIISTVAGNGTAGYSGDGGPATSAQLN
TPRGVVCDGADNLYIVDGDNQRIRKVDTSGKISTVAGNGTHWFEGDGGPATAAGLYDPIG
VACDSSGNLYIAESNSNCIRKVDSSGKISVVAGIVTQGWATYEGDGGLATSARLNYPFGV
ACDGSGNLYIADRGNHRIRKVDTSGIISTVAGNGTAGYSGDGGPATSAQLKDPVGVACDK
NGNLYIVDKDNNRIRKVDNTGKISTVAGNGTGGYAGDGSPATSAQIWVPYGVTFDNNGNM
YIADMNNKRIRKVDPSGIITTVAGNGSWKYSGDGGPAEAAGLCNAVGVACDSSGNLYIAD
SHSNCIRKVVLGTTPNNTITFPDPNLEAAIRETLDKPTEDILNTDIENITELALNFKGLA
SLEGIQHFTSLQTLYLAGNGITDLTPLQSLRNLQYLDISNNAITDLGPLTKLSNLQGLDF
SYNQLTDIQALANLTDLRYLDFSYNDGVGVLEPLRNLIGLTDLFIAGIRDSNPAQVALCS
VSSNQSTDIGAILAGLKNLENLDISNNELPDITFVNQLPNLKTIDASNNTIVDTTPLETL
SNLEKVSLYNNNITSISSLVKIPSLQEINISGNQVGGISQIEQLANLTKLDLTANPISDL
TPLTLLQDTVEVNHEEFTEPYTSWEERTDIPINRTWKIEFSHAVDTSTVNPDTIVVKEQN
NQPVTVNISRGDTDNTVLLEPPAGGYKAGQCYYLFIKKGIGSSDGKVLQNNIRMKFTIAG
TDSPAGHKLQSLPIVIQLVGGVLTLRDFCIFTNNILKICDQNKFIEHFIHKTNFTDDLPL
AKAIDNPTMLNTARNSPHMFRQTLKVLNLEDKVPASATNDYLQDIAKEIGRFKLCSFPTE
TQIMGAISDTVEELKQGFVSRNTLAEYQDEKNNVNYQVKNRWVILPGLRIEGTKTVKVGQ
TTKLSALANVHYSMKDNQNKWRTVKTNIDASDLTDSLWAAYNNLKADNYNPSDIIATVTQ
DGTVTGYNPGKVKVAVMYGGKLAICTIKVVK
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagggtttttgtcacaattcaaaattattaatttcaatcgtattggctgtatca
ttattaatgacatcagtacctgatgcctttgctgcaacgataaatactgcctcaatatcc
ggtgttgttactggtcagggcggtactccacttcctggaatattagtgctgttatacaaa
aactatgaacgtatttcaaccgccaatactgatacaaatggccagtattcttttggcgac
cttagctctggttcatacagaatgttgttcagtccgacttcatataatcaaaaaaatgga
acaacatatgcttaccagcgttctccatatagttccacgagtttatcgagtccgattaca
cttagcgacgggcagtcgttatccattaacactcaattagagaacgccggttttatttcg
ggcaaagtatatgatccagacggcaaaccgttaaccggaataatggtatgtgaagtatat
gaaggcagtacatatgggaggaattatacaaatacaagcggagaatatattataacccaa
cttccggcggagaattacaaagtacactttgatccggcagaacacaatgcccaatacggc
actgattatttggaacagtggtataacaataagcctggttctaaccttgccgatgaagta
gcagttatccaaggacaaactataaatgcggacgcttaccttcaaatctcctccggtacg
gtttcgggacttaaggcaaaggcatgcggcaaccaaatcagtttaagctggtcagccttt
cccggagcgcagagttacagcatttatcgtacctcccgctttttcggaattaactaccag
aaaatagatgctacaacatcctcttcctacacggatagcaatttgcctctatctactgac
tattggtacaaggtaaagccggtaacggccataggtgaggggagtttttcagcaccggtc
cgtaccaagacgggtgatactattatcactgatccgggggtaataataagcaccgtagct
ggaaatggcactgcggggtattcaggagatggcgggcccgccacctctgcccaattaaat
accccccggggagtggtatgtgatggtgctgacaatttgtacattgtagacggtgacaac
cagcgtatacgtaaggtcgacacatccgggaagataagcaccgtagctggaaatggtacc
cactggtttgaaggagatgggggacccgcaaccgctgccggattatacgatcctatagga
gtagcatgtgacagtagtgggaatttgtatattgcagaaagtaacagtaactgcatacgc
aaggtggacagctccgggaagataagcgttgtagctggaattgttacacaagggtgggct
acgtatgaaggagatggaggcctcgcaacttcagccagactgaattatccttttggtgta
gcatgtgatggtagcgggaatttgtatattgcagatcgcggcaatcaccgcatacgaaag
gtggatacttccggtataataagcaccgtagctggaaatggcactgcggggtattcagga
gatggcgggcccgccacctccgcccaattaaaggatcctgttggggtagcatgtgataaa
aatggtaatttgtacattgtagataaagataacaatcgcatacgcaaggtagacaatacc
gggaagataagcactgtagctggaaatggtactggtggatatgcaggggatgggagcccc
gcaacctctgctcaaatatgggttccttatggagttacttttgacaacaatggtaatatg
tacattgcagatatgaataacaagcgtatccgtaaagtagacccttcggggataatcacc
acggtagccggaaatggaagctggaagtattccggagacggaggacctgcagaagctgcc
ggattatgtaatgctgttggggtggcgtgtgatagcagcggtaatttgtatatagcagat
agtcatagcaactgcatccgtaaggtggttttaggtacaacaccaaacaatactatcact
ttccccgaccccaacctggaagcggccatcagagaaacactcgacaaaccgactgaagac
attctaaatactgacatagaaaatattacagaactggcattaaacttcaagggcctagct
tccctggaagggatacaacactttaccagcctacaaacgctatacttggccgggaatggc
ataacagatcttactccattgcagtcactccgcaacctgcagtacttggatatttccaat
aatgctataactgacctgggccccttgactaaactcagcaatttgcagggcctggatttt
tcgtacaaccagctaaccgatattcaggcattggccaaccttaccgacttacgctatctt
gatttttcttacaatgatggggtgggtgtgttggagccactgcgcaacctgatcggctta
accgatttgtttatagccggcatcagagattcaaaccccgcccaagttgccctctgcagc
gtctctagcaaccaaagcactgatattggagcaatactggccggtcttaagaacttggag
aacctggacatatccaataatgagctgcccgatatcaccttcgtcaaccagctgccgaat
ttaaaaaccatcgatgcatcgaacaataccatagtcgataccacaccgctggaaaccctg
tctaacctcgagaaagtgagcctgtataataataacatcaccagcatcagttctctagtc
aagataccttcattacaggaaatcaacatctctggcaaccaggtcgggggtatcagtcaa
attgaacagttagctaatctaactaaactggacctgaccgccaaccctatatccgacctg
actcctttgacccttttacaggataccgtagaagtaaaccatgaagaattcaccgagccc
tacacttcttgggaggaaagaaccgacatacctataaacagaacctggaaaatagaattc
agccatgcggtcgatacaagcaccgttaacccggataccattgtggtgaaagagcaaaat
aaccaaccggttaccgttaatataagcagaggagatactgacaacacagtattgctcgaa
ccacccgccggtggatacaaggcaggtcaatgctactacctctttatcaaaaaaggcatt
ggttcaagcgatggcaaagttttacaaaacaacatcaggatgaaattcactatagcaggc
actgacagtcccgctggtcataaactccagtcattgccaatagtgatccaactggttgga
ggggtactgaccctgagggacttctgtattttcaccaataacatattaaaaatttgtgac
caaaacaagtttatcgaacatttcattcacaaaaccaactttacagatgatctcccgctg
gccaaggccatcgataatccaacgatgttaaatactgcacgcaacagcccacacatgttc
agacaaacccttaaggtattgaatcttgaggacaaggtgcctgccagcgcaaccaatgac
tatttgcaagatatagcaaaagaaatcggcaggttcaagctgtgcagctttcccactgaa
actcagatcatgggcgcgatttccgacaccgtagaggaactaaaacagggtttcgtaagt
aggaacacactggctgaataccaggatgaaaagaataatgtgaattaccaggtcaagaac
aggtgggtaatcctaccggggttgcgaatcgaaggcaccaaaaccgtcaaagtaggacaa
acgaccaaactaagcgccctggccaacgtacattattcaatgaaggacaatcagaataaa
tggcgaaccgtaaaaacgaacatcgatgcttcggatcttactgacagcctttgggctgca
tacaataacttgaaggcagacaattacaatccttcggacataatcgccaccgttacccag
gatggtactgtaaccggctacaatccgggcaaagtcaaggtagcggttatgtatggcggc
aagcttgccatctgtactatcaaagtagttaaatag
DBGET
integrated database retrieval system
