Staphylococcus xylosus C2a: SXYL_01596
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Entry
SXYL_01596 CDS
T03742
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sxo
Staphylococcus xylosus C2a
Pathway
sxo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SXYL_01596 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxo03019
]
SXYL_01596 (rny)
Messenger RNA biogenesis [BR:
sxo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SXYL_01596 (rny)
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Gene cluster
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Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Glt_symporter
Motif
Other DBs
NCBI-ProteinID:
CEF18980
UniProt:
A0A5R9B4T8
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Position
Chr1:complement(1640475..1642034)
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AA seq
519 aa
AA seq
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MNLLSLLLILLGIILGVVVGYVVARNILHQKQLQARQTADDIIEQGNKEAENTKKEKLLE
AKEENQVIREKAENELRERRADLQKQEARLLQKEENLERKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLINKHEQELERISGLSQEEAAQEQLQRVEEELSQDIAILVKEKEKE
AKEAVDKNAKELLATTVQRLAAEHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVDKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLQYRTSYGQNVLKHSIEVAHLSGMLAAELGEDVTLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGESETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVIVSPDTIDD
LKSHRLARDIKSQIEDELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttgttaagcctcctactcattttgctaggtattattctcggagttgttgtaggg
tacgtcgttgcccgaaatatattgcatcaaaagcaattacaagcaagacagactgccgat
gatattatcgaacaaggtaataaagaagcagagaatactaagaaggaaaagcttctagaa
gctaaagaagaaaaccaagtcataagagaaaaagctgaaaatgagcttcgcgaaagacgt
gcagatcttcaaaagcaagaagcaagacttctacaaaaagaagaaaacttagagcgaaaa
tctgacctgttagataaaaaggatgagattttagagcaaaaagagtctaaacttgaagaa
cgacaacaacaagtagatgcaaaagagagtagtgttcaaacattaataaataagcatgaa
caagaattagaacgcatctctggtctctctcaagaggaagctgcacaagagcaacttcaa
agagttgaagaggaattgtcacaagatattgctatacttgttaaggaaaaagagaaagaa
gcaaaagaagcagtcgataaaaatgcaaaagagttattagcaactactgttcaaagatta
gctgcagaacatacatctgaatcaacagtatcagttgttaatttaccaaatgacgaaatg
aaaggtcgaatcattggtagagaaggtagaaatattagaactttagaaacgttaactggt
attgatttaattatagatgatacaccagaagcggttattctctctggttttgacccaatt
agacgtgaaattgcaagaactgcattagttaatcttgtttcagatggtcgtatccatcct
ggacgtatagaagatatggtagataaagctcgaaaagaagtagacgatatcattagagat
gctggggaacaagctacgtttgaaataaatgtgcataacatgcatccagatttagtgaaa
atcttaggtcgtttacagtatcgtactagttatggacaaaatgtattgaaacattctatt
gaagttgcacacctaagtggtatgttggcagcagaattaggagaagacgttacattggct
aaacgtgctggactacttcatgacgttggtaaagcaattgatcacgaggttgagggaagc
catgttgaaattggtgttgaattagctaaaaaatatggtgagagtgaaacggttatcaat
gcgattcattctcatcatggtgatgtcgaaccgacttctattatttctatattagtggca
gctgccgacgcattatcagcagcgagaccaggagctcgtaaagagacattagaaaactat
attagaagattggaaagactagaaacactttcagaaagctatgatggtgttgagaaagca
tttgcgatccaagcgggtagagaaattcgagttatcgtatcaccagatactatcgacgac
ttaaaatcacatcgcttagcaagagatattaagagccaaattgaagatgaacttcaatat
cctggccatataaaagtgacagttgttcgtgagactagagcaattgaatatgcaaaataa
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