Streptomyces yangpuensis: NRK68_20120
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Entry
NRK68_20120 CDS
T08585
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan00521
Streptomycin biosynthesis
syan00523
Polyketide sugar unit biosynthesis
syan00541
O-Antigen nucleotide sugar biosynthesis
syan01100
Metabolic pathways
syan01110
Biosynthesis of secondary metabolites
syan01250
Biosynthesis of nucleotide sugars
Module
syan_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NRK68_20120 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NRK68_20120 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NRK68_20120 (rfbC)
Enzymes [BR:
syan01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NRK68_20120 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UUY49311
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Position
complement(4388910..4389509)
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AA seq
199 aa
AA seq
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MKFRELSIAGAFEVTPQLHGDPRGLFTEWYRFDRLAEVVGHPLNLAQANLSVSAAGVVRG
IHFADVPRGQAKYVTCVRGAVLDVIVDLRAGSPTFGRWEGVRLDDVDRRAVYIPEGLGHG
FCALTDDATLSYLCSETYNPTGEHSVHPLDPDLGIEWPAEVPQLSARDEAAPSLAEAIST
GLLPDHAACIEFTESLRVN
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttccgcgaactctccatcgcgggcgccttcgaggtgaccccgcagctgcacggc
gacccgcgcggcctgttcaccgagtggtaccgcttcgaccgcctcgcggaggtcgtcggc
cacccgctgaacctggcccaggcgaacctctccgtctccgccgccggcgtggtccgcggc
atccacttcgccgatgtccctcgcggccaggccaagtacgtgacctgcgtgcgcggcgcc
gtactcgacgtcatcgtcgacctccgggcgggctcccccaccttcggccggtgggagggc
gtccgcctcgacgacgtcgaccgccgcgccgtctacatccccgagggcctcggccacggc
ttctgcgccctgaccgacgacgcgaccctgtcgtacctgtgctcggagacgtacaacccg
acgggcgagcactcggtgcaccccctcgacccggacctgggcatcgagtggccggccgag
gtcccgcagctgtcggcgcgcgacgaggccgccccgtcgctggccgaggccatctcgacc
gggctgctgcccgaccacgccgcctgcatcgagttcaccgagtccctgcgcgtgaactga
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