Sphingobium sp. YBL2: TZ53_05545
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Entry
TZ53_05545 CDS
T03855
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00071
Fatty acid degradation
syb00362
Benzoate degradation
syb00650
Butanoate metabolism
syb01100
Metabolic pathways
syb01120
Microbial metabolism in diverse environments
syb01200
Carbon metabolism
syb01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
TZ53_05545
09103 Lipid metabolism
00071 Fatty acid degradation
TZ53_05545
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TZ53_05545
Enzymes [BR:
syb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
TZ53_05545
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
ApbA
UDPG_MGDP_dh_N
Shikimate_DH
Pyr_redox
Methyltransf_12
MLTR_LBD
TrkA_N
2-Hacid_dh_C
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
AJR26189
UniProt:
A0A0C5XA35
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Position
1170488..1172566
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AA seq
692 aa
AA seq
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MEGDIGFIVSDNPPVNALGIGVRQGLVGALEELNADPGVKAIVLYCAGRTFFAGADITEF
GKPRQSPTLQDIIAALESSARPVVAAIHGTALGGGLETALGCAFRVAIPSARMGLPEINL
GLFAGGGGTQRLPRLIGPEKALEHVLSGKPVGARQALELGIVDAVEEGDPAVIGAAFARR
VIDENIPAVPVRDRDEKLAATRADPSAFDALAKKLTARSKGQAAPQANIDSIRRSFTMSL
DEALAIDAAANRELMAGSQSRALRHLFFAEREAARIPGLPETAKARPVQKAAIIGAGTMG
GGIAMCFAGAGVPVTVVDTTQEALDRGLERVKGNYATSVKRGSIGQAQMDERLALIAGAT
DRAAAADADIVIEAVFEDMDVKKEIFTDLEKRVKPGTILASNTSALDVDEIASVLERPQD
FVGMHFFSPANVMKLLEVVVARHSSPEAILTAMAVGKTIGKVPVWSGNCDGFIGNRMVAK
RSAQAERLLQQGAFPQQVDAALTNLGFPMGPLTTNDMSGLDIGYSIRKRRGTPFPIADAI
VESGRLGQKTGAGYYRYEPGDRTPHPSPETEALIIATSEKLGITRRDIAEEEMVQRLLFP
LINEGARILEEGIALRASDVDLVWINGYGWPRHLGGPMFYADETGLATIVAKLREMAAET
PGDPSLQPAALLVELADGGQNFADWQKSRAAA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atcgaaggcgatataggtttcatcgtcagcgacaatccgcctgtgaacgcgctgggcatc
ggcgtccggcagggactggtcggcgcgctggaagaactgaacgccgacccgggcgtgaag
gctatcgtgctttattgcgcgggacggaccttcttcgcgggcgccgacatcaccgaattc
ggcaagccgcgccagtcgcccaccctgcaggacatcatcgccgcgctggaaagctcagcc
aggccggtggtcgccgcgatccacggcaccgcgctgggcggcgggctggagacggcgctg
ggctgcgccttccgcgtcgcgatcccttccgcccggatgggcctgcccgaaatcaacctg
ggcctgttcgcaggcggcggcggcacgcagcggctgccgcgcctgatcggtccggaaaaa
gcgctggagcatgtgctgtccggcaagccggtgggcgccaggcaggcattggagctgggc
attgtcgatgccgtggaggaaggcgatcccgccgtcatcggcgccgccttcgcccgccgc
gtgatcgacgaaaacatccctgccgtgccggtgcgcgaccgcgacgagaagctggcggcg
acccgcgccgatccttcggccttcgacgcgctggcgaagaagctgacggcgcgcagcaag
ggccaggccgcgccgcaggccaatatcgattcgatccgccgctccttcaccatgagcctg
gacgaagcgctggcgatcgacgccgccgccaatcgggaactgatggcgggcagccagtcg
cgcgctctgcgtcaccttttctttgccgaacgggaagccgcccgcatccccggcctgccg
gaaaccgcaaaggcgcggcccgtgcagaaagccgcgatcatcggcgcgggcaccatgggc
ggcggcatcgccatgtgctttgccggggccggggtgcccgtcaccgtggtcgacacgacg
caggaagcgctggatcgtggtctggagcgggtgaagggcaattacgccacctcggtcaag
cgcgggtccatcggtcaggcgcagatggacgagcgccttgcgctgatcgcgggcgccacc
gaccgcgcggcggcggccgacgcggacatcgtgatcgaggcggtgttcgaggatatggac
gtcaagaaggagattttcaccgatctggaaaagcgggtgaagcccggcaccatccttgcc
tccaacacctcggcgctcgacgtggatgagatcgcgtcggtgctggagcgtccgcaggat
ttcgtcggcatgcatttcttctcgcccgccaatgtcatgaagctgctggaggtcgtggtg
gcccggcacagcagccccgaggcgatcctgaccgcgatggcggtgggcaagacgatcggc
aaggtgccggtctggtcgggcaattgcgacggcttcatcggcaaccgcatggtcgccaag
cgctccgcacaggccgaacggctgttgcagcagggggccttcccgcaacaagtcgacgcc
gccctcaccaatctgggcttcccgatggggccgctgaccacgaacgacatgtccggcctg
gacatcggttattcgatccgcaagcgccgcggcacccccttccctattgccgacgccatc
gtcgagagcgggcggctgggacaaaagacgggcgcaggctattatcgctacgaaccgggc
gaccgcacgccccatcccagtccggagacggaggcgctcatcatcgcgacatcggaaaag
ctgggcatcacccgccgcgacatagcggaggaggaaatggtgcagcggctgctgttcccg
ctgatcaacgaaggcgcgcgcatcctggaagaaggcatcgcgctgcgggcgtccgacgtc
gatctggtgtggatcaacggatatggctggccccggcatctgggtgggcccatgttctat
gcggacgaaaccggcctggcgacgatcgtcgccaagctgcgcgagatggcggccgaaacg
ccgggcgatccgtcgctgcaacccgccgcgcttctggtagagctggcggacgggggccag
aacttcgccgactggcagaaaagccgcgccgcggcctga
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