Sediminicola sp. YIK13: SB49_10460
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Entry
SB49_10460 CDS
T04145
Name
(GenBank) ATP-dependent DNA ligase
Organism
syi
Sediminicola sp. YIK13
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
RNA_ligase
CagA_N
Motif
Other DBs
NCBI-ProteinID:
ALM08182
UniProt:
A0A0S1SCN2
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Position
2356338..2357963
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AA seq
541 aa
AA seq
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MKKFAQLIKTLDSTNKTNLKVAALTAYFEEAQDRDKVWTIAILSHRRPPRPVNTTLLRQW
ASELSNIPLWLFEESYHIVGDLAETIALVIPSSSIKTDKSLTQFLEEMLALKAKSESEKK
AYLFQNWKTMDYYERFVFTKLITGGFRIGVSQKLMTKALAKATELDEDILAYKLMGNWDP
STISFQKLVLEENKSDYLSKPFPFYLAYALEDTPHNLGAIENWYVEHKWDGIRSQVIVRN
DELFVWSRGEELVTDKYPEFHSFVGEIPNGTVMDGEILPFPNGDIGTFNDLQTRIGRKTI
SKALLKKTPVIIKVYDILEWEGEDIRKIPFSERRRILEALVRPLVENTDLPLQLSETMEF
SHWDELAQERERSREVKSEGLMLKRKESPYLVGRKKGDWWKWKVDPLTIDAVLTYAMRGH
GRRSNLFTDYTFALWDQNEKGEKELVTFAKAYSGLTDAEFRKIDAWIKKNTLERFGPVRS
VTPHQVFEIAFEGIAISKRHKSGVATRFPRILRWRKDKKIEEANTLVDLKALIPGPISNH
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttgcccaacttataaaaaccctggacagcaccaacaagaccaaccttaaa
gtggctgcattaacagcctattttgaagaggcacaggatagggacaaggtgtggaccatc
gccatcctatcccatcgcaggccccctaggccggtgaacactaccctgctacgtcaatgg
gcctctgagctttccaatatcccgttgtggctcttcgaggaaagctatcatattgtaggg
gatctggccgaaaccatcgcactggtcatcccttcctcctctattaaaactgacaaaagc
ctaacccagttccttgaggaaatgttagcgctaaaagcaaagtccgaatcggaaaaaaag
gcctatctctttcagaattggaagacaatggactattatgaacgttttgtatttaccaaa
ttgatcaccggcggattccgcattggggtcagtcagaaattaatgaccaaggcacttgcc
aaggccactgaactggacgaggatattttggcttacaaattaatggggaactgggacccc
agtaccatctcctttcaaaaattggttttggaagaaaacaaaagcgattatctatccaaa
cccttccccttctacctggcatatgccctagaagatacccctcataatttaggtgctatt
gaaaactggtacgtggagcataaatgggatggcatccgatctcaggtcattgttagaaat
gatgaactatttgtctggagccgcggagaagaattggtaaccgacaaatatcccgagttc
cattccttcgttggagaaatacccaatggaaccgttatggatggtgagatcctacctttc
ccaaatggcgatatcgggacttttaatgatctccagaccaggataggcagaaagactatt
tccaaggcgttgctcaaaaaaacacccgtcattataaaagtatacgatatattggaatgg
gaaggagaggatattagaaaaatacccttttccgaaaggagaagaattttagaggccctg
gtgcggccccttgtagaaaatacagacctacccctccaattatcggagacgatggagttc
tcccattgggatgagctagcccaagaaagggaacgctccagagaagttaaaagtgaaggt
ttaatgctcaaacgcaaagagtccccttacctagttgggcgaaaaaagggcgattggtgg
aaatggaaagtagacccgctaaccatagatgccgtgctaacctacgccatgcgaggccat
ggtagacgaagcaacctctttaccgattatacctttgcgctttgggatcaaaatgaaaaa
ggcgaaaaggaactggtcacctttgccaaggcctactccggacttaccgatgcagaattc
agaaagatagacgcatggatcaaaaaaaataccctggaacgctttgggcctgtgcgcagc
gtaacaccgcatcaggtttttgaaatagcctttgagggtattgccatttccaaaagacat
aaaagtggggttgcaacgagattcccccgtattttaaggtggcgaaaagacaaaaaaata
gaagaggccaacacactcgtagatttaaaggcattaattccaggcccaataagtaaccat
gactag
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