Shewanella yunxiaonensis: KDN34_00410
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Entry
KDN34_00410 CDS
T07775
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
syk
Shewanella yunxiaonensis
Pathway
syk01501
beta-Lactam resistance
syk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KDN34_00410
01503 Cationic antimicrobial peptide (CAMP) resistance
KDN34_00410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_00410
01504 Antimicrobial resistance genes [BR:
syk01504
]
KDN34_00410
Transporters [BR:
syk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KDN34_00410
Antimicrobial resistance genes [BR:
syk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KDN34_00410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Phage_tail_X
Patched
Motif
Other DBs
NCBI-ProteinID:
QUN05990
LinkDB
All DBs
Position
complement(83664..86780)
Genome browser
AA seq
1038 aa
AA seq
DB search
MARFFIDRPIFAWVIAILLMLAGVLAIKSLPVSQYPKIAPPTVVISATYPGASAKTVEDS
VTQIIEQSMTGLDHMRYITSTSDSFGNAQVTITFNAEADPDIAQVQVQNKLQTAMTLLPQ
EVQQQGVSVNKSTSGFLMVVGFISTDGSMNKADIADFIGSSIKDPLSRVPGVGETRLFGA
QYAMRIWLDPLKLTQYDLTTADVVSAISSQNAQVAAGQFGGAPAVKGQELNATITAQSRL
QTPEQFRKIILKSNSSGANVYLSDVARVELGAQNYNISSLYNGQPSSGLAISLASGANAL
DTAAAVRAKLAELQPIFPEGLKVIYPYDTTPFVEKSIEGVVHTLLEAIVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSFAGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLSPKEATKKSMGQITGALIGIGATLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVIVAIVLTPALCATMLKPIHQGEGHEKRGFFGWFNRGFERFTSGYQSSVAKILKRSFRM
LIIYVALVGVVAWMFTRMPTAFLPDEDQGIAVSMVILPPNSTQESTEKVLKKVSDQFQKE
SVVKSVFTVAGFSFAGQGQNMGMAFVNLKDWSERTGPGQSVQAVVGRAMGAFSQFKDAMV
FAFVPPAVIELGTANGFDMYLQDLTGQGHDKLIQARNQLLGMAAQNPKLMAVRPNGQEDA
PMYKLDIDYEKLKALGVEISTVNSTLATAWGGSYVNDFIDRGRVKKVYVQGEAKYRMQPD
DLDKWYVRNSSGDMVPFSAFAKGYWEYGSPRLERFNGLSAVNIQGSAAPGYSTGEAIETM
KQLASQLPPGFGISWNGVSYEEQLSGNQAPGLYALSLLVVFLVLAALYESWSVPIAVILV
VPLGVIGALLAMNGRGLSNDVFFQVGLLTTVGLATKNAILIVEFAKDFYEKGAGLIEATL
HAVRVRLRPILMTSLAFGLGVVPLTVSNGAGSGSQHAIGTGVLGGMMSSTFLGIFFIPVF
FVVVERLFSKREESGTDQ
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttatcgatcgccccatctttgcgtgggtgatcgcaatattattgatg
ttagctggggtgctggcgattaagtcattgccagtctcccaatacccgaaaattgcgccg
ccaaccgtggtgatttctgcaacttatcctggcgcttctgccaagacagtagaagattcg
gtcacgcagatcattgaacagagcatgaccggtcttgaccacatgcgctatatcacctct
accagcgacagtttcgggaatgcacaggtaaccattacctttaacgctgaggcagatcct
gacattgctcaggtgcaagtgcagaacaaactgcagactgcgatgacactgttaccgcag
gaggtacagcagcaaggggtcagcgttaacaagtcgacctcaggattcttgatggtggta
ggttttatctccaccgatggctccatgaataaagccgatattgccgatttcattggttca
agtatcaaagatcccctcagccgtgtacccggcgtgggagaaacccgcttgtttggtgcc
cagtacgccatgcgtatatggctcgatcccctcaagcttacccaatatgatttgacgact
gccgatgttgtttctgccattagttcgcaaaacgcacaggtggcggcgggccagttcggc
ggtgcacctgcggtaaaaggccaggaactgaacgccaccattaccgcacagagccggtta
cagacaccagaacagttccgtaagatcattctgaagtcgaacagcagcggcgcaaatgtg
tatttgtcagacgtagcccgcgtagaactgggagcgcagaactacaacatctcctcgctc
tacaacggacaaccctccagtggtctggcgatcagcctggcatcaggagccaacgctctg
gataccgccgcggccgtgagagcaaagttagcagagttacaaccgatttttcctgagggg
ttaaaggttatttacccttatgacaccactccattcgtcgaaaagtcgattgaaggcgta
gtacatacgctgctggaagccatcgtactggtgttcgtcatcatgtacctgttcttgcag
aacttccgtgccacattaattcctaccattgccgttccagtcgtgttgctgggtaccttt
gccatcctgtcatttgccggttactccattaacaccttgacgatgttcgccatggtactg
gcgattggtttgctggtagacgatgccattgtggtggtagaaaacgtcgaacgtgtgatg
tcggaagagggacttagccctaaagaagccaccaagaaatcgatgggacagatcaccggc
gccttgattggtatcggtgccacgctgtctgcggtgtttgtgccgatggcatttatgtca
ggttccaccggggttatttaccgacagttctctatcactatcgtctcggccatggcgttg
tcagttatcgtggcaatcgtgctaacaccggcactttgtgccaccatgctgaagccgatc
caccaaggcgaaggacatgaaaagcgtggattttttggttggttcaaccgtggctttgaa
cgcttcacctctggctatcaatcttcagtggcgaaaatccttaaacgttctttccggatg
ctgattatttacgtggcgctggtgggtgtggttgcctggatgtttacgcggatgccaact
gccttcctacctgatgaagatcaggggattgcagtatctatggtgatattgccgccaaac
tccactcaggaaagtaccgaaaaagtactgaaaaaggtctcagatcagttccagaaagaa
tcggttgtaaaatcggtgtttaccgttgcgggcttcagtttcgccggtcagggacagaac
atggggatggccttcgttaacctgaaggactggtcagaacgtaccggaccgggacaaagt
gtccaggcggtagtcggcagagccatgggggcattttctcagtttaaagacgcgatggtg
tttgcgtttgtgccaccagcggtgattgaactgggtacagcgaatggcttcgatatgtat
ctgcaagatttgaccggacaaggccatgacaaactgatccaggcacgtaatcagttgttg
ggaatggcagcacagaatcctaagctgatggctgtacgacctaacggccaggaagatgcg
ccgatgtacaaactggatatcgattacgagaagctaaaagcacttggcgtcgaaataagt
accgtcaacagtaccttagccaccgcctggggcggttcatacgtcaacgactttattgat
cgcggccgggttaagaaagtctatgtgcagggtgaagccaagtaccgtatgcaacctgac
gatctcgacaagtggtatgtgcgtaacagcagtggcgacatggtaccgttctcggccttt
gccaagggctactgggagtacggttcaccacgactggaacgttttaacggcttgtcagca
gtgaacattcagggttcagcagcgcccggatacagtaccggcgaggccatagaaaccatg
aagcaattagccagccagttaccacctggattcgggatttcttggaatggggtctcatac
gaggaacaactctccggtaaccaggcacctggcttatatgccctgtcactgttggtggtg
ttcctggtattggcagccttgtatgaaagctggtcagtacccatcgcggtgatcttggtg
gtaccactaggagtaatcggtgcactcctggcaatgaatggccgaggattgtctaacgac
gtgttcttccaagtcggtctgttgactactgtggggctagccactaagaacgcgattctt
attgtggaattcgccaaagacttctatgagaaaggtgccggcttaatcgaagcaacactg
catgccgttcgcgtgaggcttcggcctattctgatgacatccctggctttcggccttggg
gtggtaccgttaaccgtcagcaatggcgcaggttccggtagtcagcacgccattggcaca
ggtgtcttaggggggatgatgagttcaaccttcttgggtatcttcttcattccggtattt
ttcgtcgtcgttgagcggctgttcagcaaacgagaagaatcgggaactgaccagtag
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