Shewanella yunxiaonensis: KDN34_02125
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Entry
KDN34_02125 CDS
T07775
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
syk
Shewanella yunxiaonensis
Pathway
syk01501
beta-Lactam resistance
syk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KDN34_02125
01503 Cationic antimicrobial peptide (CAMP) resistance
KDN34_02125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_02125
01504 Antimicrobial resistance genes [BR:
syk01504
]
KDN34_02125
Transporters [BR:
syk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KDN34_02125
Antimicrobial resistance genes [BR:
syk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KDN34_02125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
GP3_package
DUF4128
WS_DGAT_C
LMBR1
Motif
Other DBs
NCBI-ProteinID:
QUN06287
LinkDB
All DBs
Position
458773..461901
Genome browser
AA seq
1042 aa
AA seq
DB search
MLARFFIDRPVFAWVIAIIIMLTGVFSIVSLPVAQYPDVAPPTINIAANYTGADPQTVEN
SVTQVLEQQLTGLDGLLYFSSTSSTGQSRISVVFEQGTDPDTAQVQVQNKVQQVTSRLPT
AVQSQGVNVTKSQSDFLLVFSMFDTTDKASSYDVADFIVSNMQDPIARLPGVGDTRVFGG
QHAMRIWLDPTKLAAYDLIPSDIVSALKVQNAQVAAGGIGQLPSLADQELNATVTAQSMM
QTPEQFENIIVKHSDSGADVKLKDVARVELGSENYSSQPRVNGHPASGMAIMLAPGANAL
TTAELVKKTIANFNKELPEGYQIAFPRDSTDFIRVSIEEVVKTLFEAVLLVVVVMWIFLQ
NWRATLIPAIAVPVVLLGTFGVLEAFGFTINTLTMFGMVLSIGLLVDDAIVVVENVERLM
REEKLSPRAATIKSMKEISSALIGIAVVLSAVFLPMAFFSGSTGVIYRQFSVTIVSSMLL
SVIVALTLSPTLCASLLQPIDHEKPSRGLFIWFNRTFDRFSERYGHQVASVLRRPIRWMM
VYLLIIAGLAAMMTHLPKGFLPNEDQGILMVQYNLPTGASVKRAREVAKQIQHYFLTEEK
ANLKTIFTISGFSFSGSGQNAGMAFLAFKNWDERPGEQNSAQAIAARANRYFTTIRDARV
FAMAPPPVRGLGRSSGFSYELLANVGVERSQLTEYSKTLLAAARKDPFLTSLREGTLSDT
PELKVHIDTAKAAALGLSLSDVNSTLSTAWAGSYVNDFIDKNRVKKVYVQGDANYRSQPD
DLRFWFVRGSDSQGDVSMTPFSSFSDVVWGSGPQSLTRFNGNASIEIQGAANGVSSGDAM
DEIVKLAKQVLPEGATSYAWSGLSYQEQIAGSQSTLLYSISILVVFLCLAALYESWTVPM
SVIMVIPLGVIGAAAAAMLRGLENDIFFQVALLTTIGLSSKNAILIVEFAEVAYERGKSA
FDAALEGAKLRLRPILMTSLAFIFGTLPLAISTGAGAASRMSIGTGIVGGTITATVLAIF
LVPLFFILVRKVFPARRPVHDD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttggctcgtttttttattgaccgtccggtctttgcctgggttattgccattattatt
atgctgacgggggtattttcaattgtatccctgccggtggcgcaatatcccgatgtcgcg
ccccccaccatcaatatcgctgcaaattataccggtgccgatccacaaaccgtcgaaaac
agcgtgacgcaagtgttggagcagcagctcactggtctcgatggcttactgtatttttcc
tctacctcaagtaccggtcagagcagaatttctgtggtttttgagcagggaactgatcca
gatacggctcaggttcaggttcagaacaaagtgcagcaagtgacgtcgcgattgcccacc
gcggtgcagtcacaaggggtcaatgtgaccaaatcacaaagcgacttcctgctggttttc
tcgatgtttgataccacggataaagccagctcatatgatgtggcggactttatcgtatcg
aacatgcaagaccctatcgcacgtttgcctggtgttggcgatactcgggtgtttggtggc
caacatgctatgcggatctggttggatcccaccaagttggccgcgtatgacctaatccct
tcggatattgtttcagcattaaaagtccagaacgcgcaggtggctgccgggggcattggt
cagttgccgtctctcgccgatcaggaactgaatgcgacggtcacggcgcagtcaatgatg
cagactccggaacagtttgaaaatatcattgttaagcacagtgatagtggcgcggatgtt
aagctcaaagatgtcgctcgagtagaattgggtagtgaaaattacagtagccaacctcgg
gtcaatggacacccggcttccggtatggcgattatgctggcgcccggtgccaacgcgttg
accactgctgaattagttaaaaagaccatcgccaatttcaataaggaattgccggaaggc
taccaaatcgctttcccccgtgacagtacggattttattcgtgtctccattgaagaagtg
gtgaaaacgctgtttgaagccgtgctattggtagtggtggtgatgtggatattcctgcag
aactggcgcgccacattgatcccggcaattgccgtacctgtagtattgctgggtaccttt
ggcgtattggaagcttttggctttaccattaacactctgaccatgtttggcatggtgtta
tccattggtctgctggtggatgacgcaattgtggtggtggaaaacgttgaacgtctgatg
cgtgaagagaagctatcgccgcgggctgctaccataaaatccatgaaagagattagctcg
gcgctgatcggtatcgcagtggtgctatctgcagtgttcctgccgatggccttttttagc
ggttccaccggggtaatctaccgtcagttctctgtgacgattgtgtcttccatgttgttg
tctgtaatcgtggccttgacccttagtccgactttgtgtgccagcttgttgcagcccatt
gatcatgagaagccttctcggggattgtttatatggtttaaccgcacttttgatcgcttc
agcgaacgctacggtcatcaggtcgcaagtgtgctgcgtcgtccaatacgctggatgatg
gtgtacctgttaatcattgccggtttggcggcaatgatgacccacttgcccaaaggtttt
ctacccaatgaagaccagggcattttgatggtgcagtataacttgccgactggtgcgtct
gtgaaacgtgcgcgagaggttgcgaaacagatccagcattattttctgactgaagaaaaa
gccaatctaaaaaccatttttaccatctctggctttagttttagcggttccggtcagaat
gccgggatggcattcctcgcgtttaagaactgggacgagcgtcctggtgagcaaaatagt
gcgcaggctatcgccgctcgtgccaaccgttattttacgacgatccgcgatgcccgcgta
tttgcgatggcaccaccacccgtgcgcggtttaggacgtagtagcggtttctcctatgag
ttactcgctaatgtgggcgttgaacgttcacagttaaccgaatactccaaaacattatta
gctgctgcgcgtaaagatccgtttttgacctcgttacgtgagggcacactcagtgacacc
ccggagctcaaagtacatattgataccgctaaagcggcagcgttgggtctgagcttgtcg
gacgttaacagcaccctcagtacggcgtgggcaggcagctatgtcaatgatttcattgat
aagaaccgtgttaagaaggtctatgttcaaggcgatgctaactatcgctcgcagccggat
gacctgagattctggttcgtcagaggcagtgacagtcagggcgacgtgtcgatgacacca
ttctcgtcattcagtgatgttgtctggggctccgggccgcaaagtctgactcggtttaac
ggcaacgcttctattgaaattcagggtgctgctaacggcgtcagttccggcgatgccatg
gatgaaattgtcaaactggcgaagcaggtgttacccgaaggggcaacgtcttacgcctgg
agtggtttgtcctaccaggagcagatcgccggcagccagtctaccttgctgtacagtatt
tccattctggtggtgttcttatgtctggcagccttgtatgagagctggaccgtgccgatg
tcggtgattatggtgatccctctcggggtgatcggtgcggcggcggcggccatgttgcgt
gggttggaaaatgacattttcttccaggtggcgttgttgaccaccattgggctgtcatcc
aaaaatgccattttgattgttgaattcgcggaagttgcctatgaacgcggtaaatcagca
tttgatgccgcattggaaggggctaaattgcgcttacgaccgattctgatgacctcattg
gcctttattttcggtacgttgccgttggcgatttcaacaggtgccggagcggcaagccgt
atgtcgataggtaccgggattgtcggtggtaccattaccgcaacggttttggcgattttc
ttggtgccgttgttctttatcctggtacgcaaagtattcccggcgcggcgacccgtgcat
gacgactaa
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