Shewanella yunxiaonensis: KDN34_04945
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Entry
KDN34_04945 CDS
T07775
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00280
Valine, leucine and isoleucine degradation
syk01100
Metabolic pathways
Module
syk_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KDN34_04945
Enzymes [BR:
syk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
KDN34_04945
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
HlyD_3
RimK
ATPgrasp_ST
CBM-like
MCC_alpha_BT
Biotin_lipoyl_2
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QUN06801
LinkDB
All DBs
Position
complement(1059150..1061183)
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AA seq
677 aa
AA seq
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MTEASIRKLLIANRGEIACRIIRTCQRLGISTVAIHSAVDRQALHVRAADEAVALKGSSP
LAPYLDIEAIIAAAKRCGADAIHPGYGFLSENADFANACTKHGLIFVGPPASAIEAMGNK
SAAKTIMTEAGVPLVPGYHGPEQSASFLQQQAPMIGFPLLIKAAFGGGGKGMRVVETAAD
FAAALAAAKREANAAFTDDTVLLERYLTQPRHIEVQVFADQQGNCIYLGDRDCSLQRRHQ
KVIEEAPAPGLSDELRQQMGQAAVAAAKAIGYYGAGTIEFLLDNDQQFYFMEMNTRLQVE
HPVTELITGQDLVAWQLTVAVGEPLPLTQQQVSINGCAVEARIYAENPSHNFLPACGPLL
YLAEPVAEHLRLDTGVHQGDVITPFYDPMIAKLIIWHPQRREALRQLTQALHQYQIAGLQ
HNIVFLASLTSHPAFINENFSTHFIEQHLDELLQQATTPAPTAEVLAAVAMVKLLAFKPQ
DQVNNGSPWQQLAGFRLNAAAEWHFQLCYAATSTSFHLQVRQQAIGEYSLTINCTSATDS
AQTTVLVSGELTTAQQLKLTFNGMSQHWHFCQHQQTLFLLREGHVWQFESGPQRYDIGHD
NADTSLQAPMNGTIVTLLAQPGNFVRKGSGLLVLEAMKMEYQINAPADGTVDRFLCHAGE
LVKDGALLVQFTVRESV
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagccagcattcgcaagttactgattgccaatcgcggcgagattgcctgccgg
atcatacgaacctgtcagcgactggggattagcacagtggctatccattcagccgttgac
cgccaggctttgcatgtccgcgcggccgatgaagcggtagcactgaaaggcagttcgcca
ttggcaccctatctggatattgaggcgattattgccgcggccaagcgctgtggcgccgat
gcgatccatccgggctatggttttctctcggaaaatgccgactttgccaatgcgtgtacc
aaacatggactgatttttgttggcccgccagccagtgccattgaagcgatgggcaataaa
agtgccgccaaaacgattatgaccgaagcgggggtgccgttagtgccgggttatcacggt
ccggagcaatctgccagttttctgcaacagcaggcacccatgatcggtttcccattgcta
attaaagctgcatttggcggtggtggtaagggaatgcgggtggtggaaaccgctgcggat
tttgctgctgcactagcagcggcaaagcgtgaggccaacgccgcatttaccgatgatacc
gtactgttggagcgttacctgacgcagccgcgtcacattgaagtacaagtatttgccgat
cagcaggggaactgcatctatctgggcgatcgcgattgctcattgcaacgtcgtcatcag
aaagtcattgaagaagcgccagcccccggtctcagtgatgaactcaggcaacaaatgggg
caagctgcggtggcagcagcaaaggctatcggctattacggtgcgggcactattgaattt
ctactggacaacgaccagcagttctacttcatggaaatgaatacccgcttgcaggtagaa
catccggtgacagaactgatcactggtcaggatctggtggcctggcagctaaccgtcgct
gttggtgagccattgccgttgacgcagcagcaagtctcaatcaatggatgtgctgtggaa
gcccgaatttatgccgaaaatcccagccataactttctgccagcctgcggccccctgctg
tatctggcagaaccagtggcggaacatctgcggctggataccggggtgcaccaaggtgat
gtgattacccccttttacgatccgatgatcgctaagttaatcatctggcacccacagcgc
cgtgaagccttacgccaactgacacaggcattgcaccagtatcagatagcagggcttcaa
cataacattgtgtttctggcatccttgacctcacatcccgcatttatcaatgaaaacttc
agcacccattttattgaacagcatctcgatgaattgctgcagcaagccactacaccggcg
ccgacagctgaagtactggctgcggtagcgatggtgaagctgctggcatttaaaccacaa
gatcaggttaacaacggatcgccatggcagcagctagcagggtttcgactgaatgccgcg
gcggaatggcacttccagctgtgttatgccgcaacctcgaccagtttccatttgcaggtg
cggcaacaagctattggtgagtattcactgacaatcaattgcacttcagccactgattcc
gctcaaacaaccgtgttagtgagtggtgaattaaccaccgcacagcaactcaagctgacg
ttcaatggcatgagtcaacactggcatttctgtcagcatcaacagacgctttttttgctg
cgtgaaggtcacgtttggcagtttgagagtggaccgcagcgttacgatattggccacgac
aatgccgatacctcgctgcaagccccgatgaatggcaccatcgtgacgttgttagcacag
cctggcaattttgtccgcaaaggcagcgggctactggtactggaagcaatgaaaatggag
taccagatcaatgcgccagcagatggcactgttgaccgctttttgtgtcatgccggagaa
ctggtaaaggacggggcattgttagtccagttcactgtcagggagtcggtctga
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