Shewanella yunxiaonensis: KDN34_05430
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Entry
KDN34_05430 CDS
T07775
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
syk
Shewanella yunxiaonensis
Pathway
syk00521
Streptomycin biosynthesis
syk00523
Polyketide sugar unit biosynthesis
syk00541
O-Antigen nucleotide sugar biosynthesis
syk01100
Metabolic pathways
syk01110
Biosynthesis of secondary metabolites
syk01250
Biosynthesis of nucleotide sugars
Module
syk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KDN34_05430 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KDN34_05430 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KDN34_05430 (rfbC)
Enzymes [BR:
syk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KDN34_05430 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QUN06889
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All DBs
Position
1157818..1158366
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AA seq
182 aa
AA seq
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MNIIDTKIPAVKIIEPKVFGDGRGFFFESFNQQQFEAAVGYPVKFVQDNHSKSSKGVLRG
LHYQLPPYAQGKLVRCVVGEVFDVAVDIRETSPTFGKWVGVNLSAENKRQLWIPEGFAHG
FVTISNTAEFLYKTTNYYSKESERSILWNDNQIGIIWPFDGELNLSEKDKLATKFLSSDL
FK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatcgacaccaagatccccgccgtaaagatcattgagccaaaagtatttggt
gacggacgtggttttttctttgaaagttttaaccagcagcaatttgaagcggcagtaggt
tatccagttaaatttgtgcaagataaccattctaagtcaagtaaaggggtattaagaggt
ttacattatcaattgcctccttatgctcaaggcaaattagttagatgcgttgtgggggag
gtatttgatgttgcggtggatattcgcgaaacttctccaacatttggaaagtgggttggg
gttaacctttcagcggaaaataagcgtcagctatggatcccagaaggattcgctcacggt
tttgtaacaataagtaacactgcggaatttttatataaaactacaaattattattcgaaa
gaaagtgaacgttcaattctgtggaatgacaatcaaataggaattatatggccttttgac
ggtgaactaaatttatctgaaaaagataagttggcaaccaaatttttatcatcagaccta
tttaaataa
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