Symbiopectobacterium purcellii: K6K13_08050
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Entry
K6K13_08050 CDS
T07463
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
sym
Symbiopectobacterium purcellii
Brite
KEGG Orthology (KO) [BR:
sym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sym03400
]
K6K13_08050
DNA repair and recombination proteins [BR:
sym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
K6K13_08050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
zf-tcix
zinc_ribbon_2
AAA_22
UPF0547
AAA
DZR
FAD_binding_4
AAA_30
AAA_16
ERCC3_RAD25_C
Terminase_3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QZN97287
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All DBs
Position
complement(1744585..1746351)
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AA seq
588 aa
AA seq
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MAFTLRPYQQEAVSATLAYFRQHQHPALIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHAKYCAWGLNADIFAAGLNQRRSEGKVVFGSVQSVARNLPAFTQFSLLIIDECHR
ISDDDDSQYQQIITHLRAQNPALRLLGLTATPYRLGKGWIYQYHYHGMIRGDAQCLFHDC
IYELPLRYMIKHGFLVPPQRLDMPVVQYDFSRLNVHPHGLFSEADLNRELRRQQRVTPQI
VNQIVSYGTERNGVMIFAATVEHVREIHSLLPRGKAAFISGETPAAERDALIAAFKQQQL
HYLVNVAVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNPH
DLYMPEVGSHKPHSGSQPVQVLCPQCGFANLFWGKTTAEGDILEHYGRRCQGYEEDDSGV
RVQCDYRFRFKVCPECGAENDIAARRCHQCDHIMVDPDDMLKAALKLKDALVLRCSGMQM
TTGQDEKGEWLKITYVDEDGADVSERFRLHTPAQRHVFTQQFLRVHQRAPGLTLTWQSAQ
DILRQQTALRAPDFVIARRQGKQRQGFWQVREKLFDYEGRFRRANELR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaccctacgcccctatcaacaggaagccgtttccgccacgctggcctatttt
cggcaacatcaacaccctgcgttgatcgtactgcccactggcgcaggaaaaagtctggtg
attgccgaactggcgcggttagcgcgagggcgtgtgttggtgctggcgcacgtcaaagag
ttggttgaacagaatcacgccaaatattgcgcctggggattgaatgccgacatttttgct
gccgggctaaaccagcgccgtagcgaaggcaaagtggtgtttggcagcgtgcaatccgtg
gcgcgtaatctgcctgcctttacccagttctcgctactgattatcgatgaatgccatcgc
atcagcgatgatgatgacagccaatatcagcaaatcattacgcacctgcgcgcgcaaaac
cctgcgttgcgcctgctcggccttaccgcaaccccctatcgcctgggcaaaggctggata
tatcagtatcactatcacggcatgatacgcggtgatgctcaatgcctgtttcacgactgt
atctatgaattaccgctgcgttacatgatcaaacatggctttctggtgccgccacagcgc
ctggatatgccggtggtgcagtatgatttcagccgtctgaacgtacaccctcacggcctg
ttcagcgaagcggatctcaaccgcgaattacgacgacagcagcgcgtcacgccccagatt
gttaatcagatagtcagctacggcaccgaacgtaacggtgtgatgatctttgcggcaacc
gtggagcatgtccgagaaattcacagtctgttaccgcggggaaaagccgcttttatcagc
ggagaaactcctgccgccgagcgtgatgcgttgatcgccgcctttaagcagcaacagttg
cactatctggttaatgtggcggtgttgacgacgggctttgatgcgccgcacgtcgacgtc
atcgctatcctgcgcccaacggaatccgtcagcctgtatcagcagatcgtcggacgcggc
ctgcgcctgtcaccgggaaaaacggattgcctgattctggattacgccgggaatccccac
gatttgtatatgccggaagtcggcagccataaaccgcacagcggtagtcagccggtacag
gtgctttgcccgcagtgcggttttgccaacctgttttggggaaaaaccacggcggaaggt
gatatcctcgaacactatggccgccgctgccagggctatgaagaagacgacagcggtgta
cgtgtacagtgtgattaccggtttcgcttcaaagtatgcccggaatgtggcgcagaaaac
gacattgccgcgcgtcgttgtcaccaatgcgatcatattatggtcgatcctgacgacatg
ctgaaagccgcactcaagttgaaagatgccctggtgttacgctgtagtggcatgcagatg
acgaccggacaggatgagaaaggcgagtggctaaagatcacttatgttgatgaagacggt
gcggacgtcagcgaacgttttcgcctgcatacgcctgcccagcgccacgtatttactcaa
cagtttttacgggtgcaccagcgtgcgccaggactgacactgacatggcaatccgcccaa
gatatcttgcgccaacagaccgccctgcgtgcgccagactttgtcatagcgcgacgccaa
ggcaaacagcggcagggcttttggcaagtgagggaaaaactgtttgattatgaaggtcgt
tttcgccgcgccaatgaattgcgctag
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