Synechococcus sp. KORDI-52: KR52_00390
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Entry
KR52_00390 CDS
T03346
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
synd
Synechococcus sp. KORDI-52
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synd03016
]
KR52_00390
Enzymes [BR:
synd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KR52_00390
Transfer RNA biogenesis [BR:
synd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KR52_00390
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AII47652
UniProt:
A0A076HFZ8
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All DBs
Position
complement(58264..58908)
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AA seq
214 aa
AA seq
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MAEQSSSPAEFAVFDRDLDDAWTDRYLLSARLAVDTEAMGLIHGRDRLCLVQIADAEDRV
SCVRIGLGQTEAPNLKRLFEAASVEKVFHFARFDLAALAAGLGIAVNPVFCTKVGSRLGR
TYTPRHGLKDLVMELVGVELDKGAQSSDWGRVDELTDAQLAYAANDVRYLLPARERLEQM
LRREGRWDLAQRCFQCVPVVAELDRMRFHQIFEH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagtcgtcgtccccagcggaattcgctgtctttgatcgcgatctcgatgac
gcgtggacagaccgctatctgctgtctgcgcggcttgcggttgacaccgaagcgatgggg
ttgattcatgggcgtgatcgcctttgtctggttcagatagcggatgcagaagatcgtgtt
tcctgcgtccgcattggcttgggccagaccgaggctcccaacctcaagcgcctgtttgag
gccgcttcagtggagaaggtgttccacttcgcccggttcgatctggctgcacttgccgcc
ggtctagggattgcagtgaatcctgtgttctgcaccaaagtcggcagtcggctcggccgg
acgtacaccccccgccatggcctcaaggatctagttatggagttggtcggcgttgagctg
gataagggcgcccagagcagtgattggggccgggtggacgaactcacagatgctcagctg
gcctatgccgcgaatgacgttcgctatctcttgcccgcccgggagcgcttggaacagatg
ctgcgtcgcgaagggcgctgggatctggcacagcgctgctttcaatgtgttccggtggtt
gccgagctggatcggatgcgttttcaccagatctttgagcactga
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