Synechococcus sp. RCC307: SynRCC307_0082
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Entry
SynRCC307_0082 CDS
T00523
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
syr
Synechococcus sp. RCC307
Pathway
syr00521
Streptomycin biosynthesis
syr00523
Polyketide sugar unit biosynthesis
syr00541
O-Antigen nucleotide sugar biosynthesis
syr01100
Metabolic pathways
syr01110
Biosynthesis of secondary metabolites
syr01250
Biosynthesis of nucleotide sugars
Module
syr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SynRCC307_0082 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SynRCC307_0082 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SynRCC307_0082 (rfbC)
Enzymes [BR:
syr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SynRCC307_0082 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
CAK26985
CyanoBase:
SynRCC307_0082
UniProt:
A5GQ26
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All DBs
Position
80424..81005
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AA seq
193 aa
AA seq
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MQVEQLRSATGATVEGPLLITPRVFGDERGWFFESWNQRRFDEAAGEAVTFAQDNHSRSA
QGVLRGLHYQLPPEPQAKLVRVTVGEIFDVVVDLRQSSPTCGQWVGAQLSAENHQQLWVP
EGFAHGFLTLSAVAEVQYKTRGFWNKGCERAIRWDDPALAIAWPLEGLTVQVSEKDGLAP
SLAQAQQAGDLFR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggttgaacagctgcgctcggcgactggagccaccgtggagggccccctgctgatc
acgccgcgggtgttcggtgatgagcggggctggttttttgaaagctggaaccagcgccgc
tttgatgaggctgccggcgaagcggtcacgttcgctcaagacaaccactcccgctcagcc
caaggggttctgcgcggcttgcattaccaattgcctcctgagccccaggcgaagttggtg
agggtgacggttggcgaaatttttgacgtggtggttgatctgcgccaaagctctcccacc
tgtggccagtgggttggtgcccagttgagtgcggagaaccaccagcagctttgggtgccg
gagggattcgcccatggcttcctcaccctcagcgctgtggctgaagtgcaatacaagacc
aggggcttctggaacaaaggctgtgagcgcgccatccgttgggatgatccggccctcgcc
atcgcctggccgctggaggggctcacggttcaggtctctgaaaaagatgggttggcgcca
tcgctggcccaagcccagcaggcaggagatctgttcagatga
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