Parasynechococcus marenigrum: SYNW1244
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Entry
SYNW1244 CDS
T00144
Name
(GenBank) photolyase protein family
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW1244
Enzymes [BR:
syw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SYNW1244
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SYNW1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
CAE07759
CyanoBase:
SYNW1244
UniProt:
Q7U6U2
LinkDB
All DBs
Position
complement(1239097..1240584)
Genome browser
AA seq
495 aa
AA seq
DB search
MDITLVFPHQLFADHPAIQAGRTVALIEDPLLFGTDPQWPLRMHHQRRLLHRASMTVYAE
QLRGRGFNVIHQRHDAAPDTQGHLQLLHSAGYRHVHLVDLVDHWLERRLNAFAESVALRV
SVLPTPMLLTPADVLEKHFGTGKKPLMAKFYEMQRTRLGVLMDAEGRPVGGRWSFDADNR
KKLPKDISVPPIPVATPSTVVNTSRQQLAQENLPGVGKLDGFYYPIDHKEASRWLDNFLD
ERLVQFGAYEDAISTQHQVMWHGVLTPMLNIGLLTPQQVLDRTLARAEVGDVPLNSLEGF
IRQIIGWREFMAAMYRRHGVTMRNGNFWEVEDRPIPEAFYTGSTGLPPIDDAISHALDTG
YCHHIERLMLLGNVMLLCGFHPTRVYSWFMELFVDAYDWVMVPNVYGMSQFADGGIFTTK
PYVSGSNYVRKMSDYRKGAWCEVWDGLFWSFIRRHETFFRSQFRLAMMARNLDRMALETL
LTHQRKAADFLDGLT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggacatcaccctggtctttccccatcaactgtttgctgatcaccccgcgattcaggcc
ggtcgcaccgtggccctgatcgaagacccgttgctgttcggaactgatccgcagtggccc
ctgcggatgcatcaccagcgccggctcctgcaccgagcctcgatgactgtctacgccgaa
cagctacgaggtcgtggcttcaacgtgattcatcagcgccatgacgctgcaccagacacc
cagggccacctgcagctgttgcattccgctggatatcgccatgttcacctcgttgacctg
gtggatcactggcttgaacgtcggttgaacgccttcgctgagagtgtcgctctgcgggta
tccgtgctgccgacaccgatgttgttaacccccgctgacgtgctcgagaagcactttggg
acgggcaaaaagcccttgatggccaagttctacgagatgcagcgcacccggctgggggtg
ctcatggacgcggaggggcgacccgttggcggccgatggagttttgatgctgacaaccgc
aagaaactgcccaaagacatcagcgttcctccgatacccgtcgccacgccatcgactgtg
gtgaacacatcacgacagcaattggcgcaggagaatttgcccggggtcggcaagctggat
ggcttttactaccccattgaccacaaggaagcctcccgctggctcgacaatttccttgac
gaacgcctggttcagttcggggcctatgaagacgccatcagcacgcagcatcaggtgatg
tggcatggcgtgctcacaccgatgctgaacattggtctgctgacgcctcagcaggtgctg
gatcggaccctggcccgtgcggaggttggtgatgtgccgctcaactcacttgagggcttc
atccgccaaatcattggctggcgcgaattcatggctgccatgtatcgacgccatggggtg
accatgcgcaatggcaatttctgggaggtggaggatcgcccgattcccgaagccttctac
accggaagcacgggtttacccccgattgatgacgccatcagccatgccttggacacgggt
tattgccaccacatcgaacggttgatgctgctgggcaacgtgatgctgctgtgtggcttt
catcccacgcgggtgtacagctggtttatggaactgtttgttgatgcctacgactgggtg
atggtgcccaacgtctacggcatgagtcagttcgccgatggcggcatcttcaccacaaag
ccctacgtgtccggctcgaactacgtccgcaagatgtcggactatcggaaaggtgcgtgg
tgtgaagtgtgggacgggcttttctggagtttcattcgacgccacgaaacctttttcagg
agtcagttccggctggcgatgatggctcggaacctcgacaggatggcgctggaaacactg
ttgacgcatcagcgcaaggcggctgattttcttgacggcctcacctga
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