Shewanella zhangzhouensis: K0H63_19400
Help
Entry
K0H63_19400 CDS
T09194
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
szh
Shewanella zhangzhouensis
Pathway
szh01501
beta-Lactam resistance
szh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0H63_19400
01503 Cationic antimicrobial peptide (CAMP) resistance
K0H63_19400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
szh02000
]
K0H63_19400
01504 Antimicrobial resistance genes [BR:
szh01504
]
K0H63_19400
Transporters [BR:
szh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0H63_19400
Antimicrobial resistance genes [BR:
szh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0H63_19400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QYK05180
LinkDB
All DBs
Position
4383339..4386479
Genome browser
AA seq
1046 aa
AA seq
DB search
MARFFIDRPIFAWVIAILVMLAGVLAIKSLPVSQYPNIAPPTVVISANYPGASAKTLEDS
VTQVIEQRMTGLDHLRYINSTSDGFGNAEITLTFNAEADADIAQVQVQNKLQSAMPLLPQ
EVQAQGVRVNKSTSGFLMVLGFVSEDGSLTKNDIADYVGSNVQDPLSRVAGVGEITLFGA
PYAMRIWLDPLKLTQYSLTTQDVIAAIREQNAQVSAGQLGGAPAVLGQELNATVSAQSRL
ETPEEFRKIILKSDTSGAKVFLGDVARVELGAESYVVESFYNGRPAAGIAISLATGANAL
DTATRVREKIAEMKPFFPAGLEVVYPYDTTPFVKQSIEGVVHTLLEAVVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
QEEGLGPVEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCATMLKPLKPGHAHGQHGFFGWFNRSFEKMTSRYEGSVAAILKRSARV
MAIYLALVVATGWIFMRMPTAFLPDEDQGILFAQVILPTNSSQESTVKVLEKMDKFFREE
EKDNVNSVFSVAGFSFAGMGQNMGIAFVGMKDWAVREGAGQDVFSLQGRAMMAFSQIKEA
FVFAFAPPAVIELGTANGFDFYLQDKNGQGHAKLLEARNQLLGMAAQNPNLVGVRPNGQE
DAPMYQLDIDHAKLRALGVDISSVNSAIATAWGGSYVNDFIDRGRVKKVYVQGDAEYRMQ
PEDLNTWYVRNAKGEMVPFSAFATGRWDFGSPRLERFNGLPAMNIQGATAPGYSTGDAMN
DIEKIVEQLPPGFGVEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVV
LVVPLGIIGALLAMNGRGLSNDVFFQVGLLTTVGLATKNAILIVEFAKEYYEKGAGLIEA
TLHAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGAQNAIGTGVLGGMMSSTFLGIFFVP
LFFVIVERIFSKREKKAQSGAEAGKH
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttattgatcgacccatttttgcatgggtgatcgcgattttggtgatg
ctggcaggggtattggctatcaaaagcctgcccgtgtcccagtacccgaacatcgcacca
cccactgtggtgatctccgccaactacccaggcgcctccgccaagacgctggaagactcg
gtcacccaggtgattgagcagcgcatgacgggcttggatcacctgcgttatataaattcc
accagtgatggtttcggtaacgccgaaatcaccctgacctttaatgccgaggccgatgcc
gacatcgcccaggtacaggttcagaacaaactgcaatcggctatgcctctgctgccgcag
gaagttcaggcgcagggtgtcagggtgaacaagtccacctcgggctttttgatggtactg
ggctttgtgtcggaagatggcagcctgaccaaaaacgatatcgccgactatgtgggctcc
aatgttcaggaccccttaagccgggttgccggtgtgggtgaaattaccctgttcggtgcg
ccttacgccatgcgtatatggctggacccactgaaactgacccaatacagcctgaccacg
caggacgtgattgcagcgattcgcgagcaaaacgcccaggtgtcagcaggtcagctcggt
ggtgcgcctgcggtactgggccaggagctgaacgctacagtatcggcccagagccgtctg
gagaccccggaagagttccgcaagattattctcaagtcagataccagcggtgccaaggtg
ttcctcggcgacgtagccagggttgagctgggcgccgaaagctatgtggtggagtcgttc
tacaacggccgcccggctgccggtatcgccatcagcctggcaacgggagccaacgccctg
gataccgcgacccgggtgcgggaaaaaatcgccgaaatgaagcccttcttcccggcgggc
ctcgaggtggtttatccctacgacaccacgcccttcgttaaacaatccatcgaaggcgta
gtgcacaccctgctggaagccgtggtactggtatttgtgattatgtacctgttcctgcag
aacttccgcgcaacccttatcccgacgattgccgtgcctgtggtactgctgggtactttc
gccattctgtcggcctttggtttctccattaacaccctgaccatgttcgccatggtgctg
gccatcggtctcttggtagacgatgccatcgtggtggtggaaaacgttgaacgtgtgatg
caggaagaaggtctggggccggttgaagccacccgcaagtccatggatcagatcaccggc
gccctggtgggtatcggtctgaccctgtcggcggtattcgtgcccatggcctttatgtca
ggttcaaccggggtgatttaccgtcagttctccatcactatcgtgtcggccatggcgctg
tcggtactggtggccctgatcctgacgcccgccctgtgcgccaccatgctcaagcctctc
aagccaggccatgcccatggtcagcacggcttctttggctggttcaaccgcagttttgaa
aagatgacctcgcgctacgagggcagcgttgccgcaatcctcaagcgctcagccagggtg
atggcgatatatctggcattggtggtcgcgaccggctggatctttatgcgtatgcccact
gcgttcctgcccgatgaagaccagggcatcctctttgcccaggtgatcctgcccaccaac
tccagccaggagtccacggtgaaggtgctggaaaagatggacaagttcttccgcgaagag
gaaaaggacaacgtgaactctgtgttctcggtggccggcttctcctttgcgggcatgggt
cagaacatgggtattgccttcgttggcatgaaagattgggccgtgcgtgaaggcgcgggg
caggacgtgttctcgttgcagggtcgtgccatgatggccttctcccagattaaagaagcc
ttcgtgtttgcctttgcgccaccggcagtgattgaactcggtaccgccaacggtttcgac
ttctacctgcaggacaagaatggccagggtcacgccaagctgctggaggcccgtaaccaa
ctgctgggcatggcggcacaaaatcccaacctggtgggcgtgcgccccaacggtcaggaa
gatgcgcccatgtaccagctggatatcgaccatgctaaactgcgcgctctgggtgtggat
atctcctcggtgaacagtgccatcgccaccgcctggggcggcagctatgtgaacgacttt
atcgaccgtggacgggtgaagaaggtgtatgtacagggcgatgccgagtaccggatgcag
cctgaagacctgaacacctggtatgtacgtaacgccaagggcgaaatggtgcccttctcg
gccttcgccaccggccgctgggactttggctcaccacgtctggagcgcttcaacggcttg
cccgccatgaatatccagggcgccaccgcccctggctacagcacgggtgatgccatgaat
gacatcgaaaagattgtcgagcagttgccaccgggctttggtgtcgagtggaacggcctg
tcctatgaagagcgactctcaggcaaccaggctccggccctctatgccctgtcgattctg
gtcgtgttcctggtacttgcggccctctatgagagctggtcagtgccctttgccgtggtg
ctggttgtgccgctggggatcatcggtgccctgctggccatgaatggacgcggtctgtcc
aacgacgtgttcttccaggttggcctcttgaccactgtgggtctggccaccaagaacgcc
attcttatcgtggaattcgccaaagaatactatgagaagggtgcgggtctgattgaggcc
acgctgcacgcagtaagagtgcgtttgcgccccattctgatgacctcgctggcctttggt
ctgggggttgtaccactggccatttccaccggtgtggggtcgggtgcccagaacgccatc
ggtaccggtgtgctcggcggtatgatgagttcgaccttccttggtatcttcttcgtgccg
ctgttctttgtgattgttgagcgtatcttcagcaagcgcgagaaaaaggcacaatccggt
gcggaggctggcaaacactga
DBGET
integrated database retrieval system
