Shinella zoogloeoides: K8M09_09465
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Entry
K8M09_09465 CDS
T07727
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
szo03000
]
K8M09_09465
Transcription factors [BR:
szo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
K8M09_09465
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_36
Motif
Other DBs
NCBI-ProteinID:
UEX83470
LinkDB
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Position
1881623..1882666
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AA seq
347 aa
AA seq
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MDRTKSDGRTAATAPSSERPTLKTIAFMTGLGITTVSRALKDAPDISSETKERVRLVARQ
IGYQPNRAGVRLRTGKTNVISLILSLEEEIMGLTSPMVVGISEVLAATQYHLVVTPYRTQ
GNALDPVRYVLETGAADGVIISRTEPKDPRVALMMERNFPFVTHGRTEMGLAHPYHDFDN
ERFAYEAVRKLVERGRKRIMLLQPPPYLTFYLHMRAGFEKGIRDFGATVVPFNGVDIDHS
LAEIRAAAEALFDAPGAPDGIVSGSGSGAIALIAALEAKGLRLGQDIDLVSKEPHVLLQW
LRPEVMTMREDIRLAGRELAKAVLARIEGRPPEELQTLSYPIPTGEV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggacaggacgaaaagcgatggccgcaccgcagcaactgcgccctccagcgagcggcca
acgctgaagacgatcgccttcatgaccggcctcggcatcaccaccgtgtctcgcgccctc
aaggatgcgcccgacatcagcagcgagacgaaggagcgcgtgcgcctcgtcgcccggcag
atcggctaccagcccaaccgggcgggcgtgcgccttcgaaccggcaagaccaatgtcatc
agcctcatcctcagcctcgaggaagagatcatgggcctgaccagcccgatggtggtgggc
atttcggaagtgctggccgccacgcagtaccatctcgtggtgacgccttaccgcacgcag
ggcaacgcgctcgatccggtgcgctacgtgctggagaccggcgcggccgacggcgtgatc
atctcgcgcaccgagccgaaagacccgcgcgtcgcgctgatgatggagcgcaacttcccc
ttcgtcacgcatggccgcacggaaatgggcctcgcccacccctaccacgacttcgacaac
gagcgcttcgcctatgaggcggtgcgcaagctggtcgagcgcgggcgcaagcggatcatg
ctgctccagccgccgccatacctcaccttctacctgcatatgcgagccggcttcgagaaa
ggcatccgggatttcggcgcgacggtcgtgcccttcaacggcgtcgatatcgaccatagc
ctcgccgaaatccgcgcggccgccgaagcgctgttcgacgcgcccggcgcgccggacggc
atcgtctcgggcagcggctcgggcgccatcgcgctcatcgcggcgctggaggccaagggc
ctcaggctcgggcaggatatcgatctcgtctccaaggagccgcatgtcctgctgcaatgg
ttgcggccggaagtgatgaccatgcgcgaggacatccgccttgccggccgggaactggcg
aaagcggttctcgcccgcatcgagggacgtccaccggaggagttgcagacgctgagctat
ccgatcccgacgggagaggtgtaa
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