Tumebacillus algifaecis: CIG75_09945
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Entry
CIG75_09945 CDS
T04994
Name
(GenBank) DNA polymerase domain-containing protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
tab
Tumebacillus algifaecis
Pathway
tab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CIG75_09945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tab03400
]
CIG75_09945
Enzymes [BR:
tab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CIG75_09945
DNA repair and recombination proteins [BR:
tab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CIG75_09945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
ASS75275
UniProt:
A0A223D1C5
LinkDB
All DBs
Position
2247600..2248529
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AA seq
309 aa
AA seq
DB search
MKTNVLMAEYPVTVSNLDKVLWPEQGITKAEYIHYMIVMSRVMLRHYENRLLTVIRYPHG
IHEKSFYQKNVPSGAPDWIQTYPVWSDDSQREIAYMLANNTSSLIWLANQAAMELHLSYS
LIDKLEEPTNIAFDLDPTVKIADRHSFRKACQVALLLKEVLDDLGLQSYPKTSGATGLQV
FVPIAKGYTFADTRQITHFLGNYLVQKAPDLVTIERLTKDRGDKVYFDYLQHHQSKTLSG
PYTPRAVPSGAVSAPLAWEEIKEGVEPHMFTLRTMPKRIEMYGDLFEPMSRPGVDIKEII
HFIKNHPKG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaatgtgctgatggccgaatacccggtgacggtcagcaatctggacaaggtg
ctatggccggagcaggggattacgaaagcggaatacatccactacatgatcgtgatgagc
agggtcatgttgcggcattatgaaaatcgtttattgaccgtcattcgctacccacacggc
attcatgagaaatcgttttatcaaaaaaacgtcccaagcggcgcaccagattggattcaa
acctatccagtctggtcggatgactcgcagcgggaaattgcgtacatgctcgcgaacaac
acgtcgagcttgatctggctcgccaatcaggcggcgatggaactgcatctgtcctactcg
ttgatcgacaagttagaagagccgaccaacatcgcgttcgatctcgacccgaccgtgaaa
atagcagatcgccacagttttcgcaaagcgtgccaagtggcgctcctgttaaaagaagtc
ctcgacgatctcgggttgcaaagctatccgaaaacgtcaggtgcgaccgggttgcaagtg
tttgtgccgatcgcgaaagggtacacttttgctgatacgagacagatcacacacttcctc
ggcaactatttggtacaaaaagcgcccgacctcgtcacgatcgagcgtctgaccaaagac
cgcggcgacaaagtctattttgactatcttcagcatcatcagagcaaaacgctctcgggg
ccctatacgccgcgcgctgtgccatcgggggcggtgtccgctccgctggcttgggaggag
atcaaagagggagtggagccgcacatgttcacgctgcgcacgatgccgaaacggatcgag
atgtatggcgatctgtttgaaccgatgagccgacctggtgttgacatcaaagagatcatt
cattttattaagaaccacccgaaaggataa
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