Thalassomonas actiniarum: SG35_006630
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Entry
SG35_006630 CDS
T08826
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
tact
Thalassomonas actiniarum
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tact03009
]
SG35_006630
03016 Transfer RNA biogenesis [BR:
tact03016
]
SG35_006630
Enzymes [BR:
tact01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
SG35_006630
5.4.99.29 23S rRNA pseudouridine746 synthase
SG35_006630
Ribosome biogenesis [BR:
tact03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SG35_006630
Transfer RNA biogenesis [BR:
tact03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
SG35_006630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WDE00312
LinkDB
All DBs
Position
1493820..1495517
Genome browser
AA seq
565 aa
AA seq
DB search
MQSPESCFTPFNQTLDDIALPQRFTFPFYYEPHPLCLLAAKELQQHLATQELWQHNFGLN
GDPEMVIGKMFGVLVVENADGEIGYLSAFSGKLANQNLLPGFVPPVFDMLAQDSFFHQGQ
LVINDINDRLEQLEANPAIAELTLALSGELAAENEAIELYRQEMIAGRKSRKAQRAEAAN
LLNEADFSTLQEKLSRESVRDKNRLRDLKFYWQERVNLIRQQLAVLTDEIGQLKDKRKVL
SAQLQQKLFQQYRFLNKDGAEKNLADMFSDTAYQTPPAGAGECAAPKLLQYCFKWQMKPV
AMAEFWWGQSPKSEIRKHKNFYGACLGKCQPILGHMLEGIEMDENPLLNNPAVDKAIDIL
FQDDDMLVINKPADLLSVPGKSITDSVYSRMKQLFPAATGPLIVHRLDMSTSGLMVIALN
KRAHKNLQKQFIERSVKKRYQALLQGELAQGELQQDSGTITLPLRTDFDDRPRQLVCQQY
GKPAETFWEVKERGNNRTKVYLYPKTGRTHQLRVHCAHPLGLNLPILGDDLYGDKGERLH
LHAQLLELQHPRSKQVMSFSAEAQF
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcccccgaatcttgttttaccccatttaaccaaacgctagatgacattgcttta
ccgcagcgtttcacctttcccttttattatgagcctcatcccttgtgcctgctggcggca
aaagagctgcagcagcacctggcaacacaagagctgtggcagcataactttggcctcaat
ggcgatcccgagatggtgataggtaagatgtttggggttttggtggtggaaaatgccgat
ggggagatcggctatttatcggctttttccggcaagctggccaatcaaaatttactaccg
ggttttgtgccgccggtatttgatatgttggcacaagacagttttttccatcagggacag
ctagtgatcaatgatatcaatgatcggctggaacagctggaagctaatccggcaattgcc
gaactaacccttgctttatccggtgaattagcagcggaaaatgaagccattgagctttac
cggcaagaaatgatcgccgggcgtaaaagccggaaagcgcaaagggctgaggcagcgaat
cttctgaatgaggccgattttagcactttgcaggaaaagcttagccgagagagtgtcagg
gataaaaaccgtttaagagatttgaaattttattggcaagaaagagtaaatcttatccgg
cagcagttagctgtgttgacggatgaaatcgggcaattaaaagataaacgcaaagtgtta
tctgcacagctgcagcaaaaattatttcagcagtatcgttttttaaataaagacggggca
gagaaaaacctggccgatatgttcagcgataccgcctaccagactcccccggcaggggcg
ggagaatgtgcggctcccaagttgttgcagtattgctttaaatggcaaatgaaacctgtg
gctatggcggaattttggtgggggcagtcgccaaaatcggagatcagaaaacataaaaat
ttttacggtgcctgtttggggaaatgccagccgatcctcggccacatgctggaaggtatc
gagatggatgaaaatccgctgctgaacaatcctgcggtagataaagccatagatatcctg
ttccaggatgacgatatgctggtgatcaataagccggcagacttgttgtcggtaccgggt
aagagcataaccgattctgtttatagccggatgaaacagctttttcccgccgctaccggt
ccgctgattgttcatcgcctggacatgtctacctccgggcttatggtaattgccttaaat
aaacgcgcccataaaaacctgcaaaaacaatttattgagcgcagtgtgaaaaagcgttat
caagccctgttacaaggagaattagcacagggggagctgcaacaggacagcggtaccatt
accttgccgctgcgtaccgattttgatgacaggcccaggcagctggtttgtcagcaatac
ggtaaaccggcagagactttctgggaggtgaaagagcggggcaataacaggactaaggtt
tatctttatccgaaaaccggccgtacccaccaactgcgggtacattgtgcccaccctttg
ggattaaacctgccgattttaggggatgatctttatggcgataaaggcgagcgcttgcac
ctgcatgcgcagttgctggagctgcagcatccgagaagcaaacaagtgatgtcttttagt
gccgaagcacaattctaa
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